RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TMIGD3P0DMS9 266 aaPredicted RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 GLI4P10075 376 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 POU1F1P28069 291 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 PEX2P28328 305 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC6A6P31641 620 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 UQCRC1P31930 480 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 TIMP3P35625 211 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 DAPP51397 102 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 DAP3P51398 398 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 P2RY4P51582 365 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 ALDH3A2P51648 485 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC16A1P53985 500 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 RAD23AP54725 363 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 RPS4XP62701 263 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SIRPAP78324 504 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 PMPCAQ10713 525 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 ZP4Q12836 540 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 TOP3AQ13472 1001 aaPredicted RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC17A1Q14916 467 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 PDK3Q15120 406 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 POU4F3Q15319 338 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 LRRC36Q1X8D7 754 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC36A3Q495N2 470 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 RIPPLY2Q5TAB7 128 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 ANKRD34AQ69YU3 496 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MTFR2Q6P444 385 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 FAHD1Q6P587 224 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 KLHL17Q6TDP4 642 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 CASP12Q6UXS9 341 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 CD300LDQ6UXZ3 194 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF620Q6ZNG0 422 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 HDDC2Q7Z4H3 204 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 PXKQ7Z7A4 578 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 GALNT5Q7Z7M9 940 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 FJX1Q86VR8 437 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 EPHX4Q8IUS5 362 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 GCNT2Q8N0V5 402 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 KDM8Q8N371 416 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 RPRMLQ8N4K4 120 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 CNEP1R1Q8N9A8 125 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 C9orf106Q8NAJ2 232 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 OR9K2Q8NGE7 335 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MOSPD2Q8NHP6 518 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MBD3L2Q8NHZ7 208 aaPredicted RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 TEX47Q8TBZ9 253 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MAGEE2Q8TD90 523 aaPredicted RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 INTS12Q96CB8 462 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SAMD8Q96LT4 415 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 NIPSNAP1Q9BPW8 284 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 TTYH2Q9BSA4 534 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 IFT27Q9BW83 186 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 POLDIP3Q9BY77 421 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 VCX3BQ9H321 246 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 OR52D1Q9H346 318 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 EGLN3Q9H6Z9 239 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 RNF122Q9H9V4 155 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SMURF2Q9HAU4 748 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MCCC2Q9HCC0 563 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 C8orf4Q9NR00 106 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 TAS2R5Q9NYW4 299 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 USE1Q9NZ43 259 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 IL20RAQ9UHF4 553 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SIGLEC7Q9Y286 467 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 NOSIPQ9Y314 301 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 MEMO1Q9Y316 297 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 LRRK2Q5S007 2527 aa5.88□□□□□ -1.47
CHRNA3-204ENST00000559002 SHANK1Q9Y566 2161 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 IGKV3D-15A0A087WSY6 115 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 LOC102725191A0A1B0GVB3 256 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF726A6NNF4 738 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 HSPB2A8KAH6 182 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF724A8MTY0 619 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 MS4A18H0YCH9 400 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 SOCS2O14508 198 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 XKRYO14609 159 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CASQ2O14958 399 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 LRRTM2O43300 516 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 TRAF3IP2O43734 574 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 MITFO75030 526 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 SS18L1O75177 396 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PTP4A3O75365 173 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 MRPL33O75394 65 aaKnown RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PPP1R3DO95685 299 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 BCL10O95999 233 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ALPLP05186 524 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 YES1P07947 543 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 OSMP13725 252 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 HLA-DOBP13765 273 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 IFNGR1P15260 489 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 NOS3P29474 1203 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 AGTR1P30556 359 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 RPS6KA3P51812 740 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CLDN17P56750 224 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CTXN1P60606 82 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PPP2R2BQ00005 443 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 MELKQ14680 651 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 HSPB2Q16082 182 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ACKR1Q16570 336 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 RFX4Q33E94 735 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms