RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FN1P02751 2386 aaKnown RBP10.94□□□□□ -0.66
SMAD3-208ENST00000558827 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 OVOL3O00110 214 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 FXYD1O00168 92 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 OR2T1O43869 369 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 SSX4O60224 188 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 SLC43A1O75387 559 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 CH25HO95992 272 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 IGHV4-39P01824 125 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-208ENST00000558827 AHCYP23526 432 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 PTAFRP25105 342 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 PCSK6P29122 969 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 PCGF2P35227 344 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 CRYBA2P53672 197 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 RBBP4Q09028 425 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 NRF1Q16656 503 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 CLEC12BQ2HXU8 276 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 VMACQ2NL98 169 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 PRSS57Q6UWY2 283 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 NET1Q7Z628 596 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-208ENST00000558827 UEVLDQ8IX04 471 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 GPR137CQ8N3F9 429 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 LRRC17Q8N6Y2 441 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 TSPEARQ8WU66 669 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 BCL2L2Q92843 193 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-208ENST00000558827 TRMT61AQ96FX7 289 aaKnown RBP10.94□□□□□ -0.66
SMAD3-208ENST00000558827 COX4I2Q96KJ9 171 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 SIKE1Q9BRV8 207 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 ASPNQ9BXN1 380 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 CACNG6Q9BXT2 260 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 AMBRA1Q9C0C7 1298 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 C12orf10Q9HB07 376 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 GPR35Q9HC97 309 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 SLC7A7Q9UM01 511 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 B3GALT5Q9Y2C3 310 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 AMDHD2Q9Y303 409 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 SH3GLB1Q9Y371 365 aa10.94□□□□□ -0.66
SMAD3-208ENST00000558827 TRAF3IP2O43734 574 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF432O94892 652 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 LYPD3O95274 346 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 WNT11O96014 354 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CELA3BP08861 270 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 TTKP33981 857 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CAPZA2P47755 286 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 UBE2NP61088 152 aaKnown RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 POU3F1Q03052 451 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CAMK2DQ13557 499 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CEACAM16Q2WEN9 425 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 HSP90B2PQ58FF3 399 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 FAM91A1Q658Y4 838 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 VHLLQ6RSH7 139 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 PATL1Q86TB9 770 aaKnown RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CARM1Q86X55 608 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 FBXL14Q8N1E6 418 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 C1orf162Q8NEQ5 155 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 BHLHE22Q8NFJ8 381 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 C10orf82Q8WW14 230 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 RCN3Q96D15 328 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 POM121Q96HA1 1249 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 HS6ST2Q96MM7 605 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 OR2M2Q96R28 347 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 DHRS9Q9BPW9 319 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CRLF2Q9HC73 371 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 CAPN7Q9Y6W3 813 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 JMJD1CQ15652 2540 aa10.93□□□□□ -0.66
SMAD3-208ENST00000558827 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
SMAD3-208ENST00000558827 IGHV1-18A0A0C4DH31 117 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 SLC35F4A4IF30 521 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF503-AS2A6NEH8 195 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 LY6HO94772 140 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ADORA3P0DMS8 318 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 OR1E2P47887 323 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 LRRC23Q53EV4 343 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-208ENST00000558827 AGAP6Q5VW22 663 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 TTC33Q6PID6 262 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-208ENST00000558827 DEF8Q6ZN54 512 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ABHD12BQ7Z5M8 362 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-208ENST00000558827 MYPOPQ86VE0 399 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-208ENST00000558827 CALHM3Q86XJ0 350 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 MUC15Q8N387 334 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ADAMTS16Q8TE57 1224 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 FBXO17Q96EF6 278 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF583Q96ND8 569 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 EPYCQ99645 322 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 NELFAQ9H3P2 528 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 PRDM4Q9UKN5 801 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 MGAT4BQ9UQ53 548 aa10.92□□□□□ -0.66
SMAD3-208ENST00000558827 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-208ENST00000558827 ABCA1O95477 2261 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF726A6NNF4 738 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 PLPP3O14495 311 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 CHP2O43745 196 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 OR6A2O95222 327 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 UMPSP11172 480 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 PAX1P15863 534 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 MDH1P40925 334 aaKnown RBP10.91□□□□□ -0.66
SMAD3-208ENST00000558827 YAP1P46937 504 aaKnown RBP10.91□□□□□ -0.66
SMAD3-208ENST00000558827 IDH3GP51553 393 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms