RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MUS81Q96NY9 551 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 ALKBH3Q96Q83 286 aaPredicted RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 OR52B2Q96RD2 323 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 RHNO1Q9BSD3 238 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TMBIM4Q9HC24 238 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 MOV10Q9HCE1 1003 aaKnown RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 A4GALTQ9NPC4 353 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TCF7L2Q9NQB0 619 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 RLIMQ9NVW2 624 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 RPS6KB2Q9UBS0 482 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 RASD1Q9Y272 281 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 B3GALT5Q9Y2C3 310 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 JMJD1CQ15652 2540 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 E7EQL1 145 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ATP6V1G2-DDX39BF2Z307 99 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 AKAP8O43823 692 aaKnown RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CD5LO43866 347 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SSX4O60224 188 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 NDUFS7O75251 213 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ALX3O95076 343 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 PPIBP23284 216 aaKnown RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 PRKAR1BP31321 381 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ACAA2P42765 397 aaKnown RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SH3BGRP55822 239 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 IRX1P78414 480 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SLC25A3Q00325 362 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CHRNB3Q05901 458 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 BNIP2Q12982 314 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CDK5R2Q13319 367 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 RGNQ15493 299 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 TBRG1Q3YBR2 411 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 GCNT6Q5T4J0 391 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM225Q6GV28 225 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 C5orf46Q6UWT4 87 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 DNM1P46Q6ZS02 220 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SERPINA11Q86U17 422 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 PRIMA1Q86XR5 153 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 KRT73Q86Y46 540 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CLIP4Q8N3C7 705 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 MFSD8Q8NHS3 518 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 LRRC8CQ8TDW0 803 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 GTF2H4Q92759 462 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SLC38A4Q969I6 547 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF385AQ96PM9 386 aaKnown RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF317Q96PQ6 595 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 KCNS3Q9BQ31 491 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 SPATA5L1Q9BVQ7 753 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 PAIP1Q9H074 479 aaKnown RBP7.05□□□□□ -1.28
TRAF3-205ENST00000558700 BCL2L10Q9HD36 194 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CORO2BQ9UQ03 480 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 RCE1Q9Y256 329 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 FKBP7Q9Y680 259 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
TRAF3-205ENST00000558700 CLIC1O00299 241 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 NR5A2O00482 541 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 AIM2O14862 343 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 NPIPB7O75200 414 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 TGDSO95455 350 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 LGI1O95970 557 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 PNMTP11086 282 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 PRG2P13727 222 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 ETS2P15036 469 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SLC25A16P16260 332 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 HOXB9P17482 250 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 CDH2P19022 906 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 PTNP21246 168 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SELENOPP49908 381 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 P2RY4P51582 365 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 UBE2NP61088 152 aaKnown RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SNRPD2P62316 118 aaKnown RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 RAB35Q15286 201 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 HIKESHIQ53FT3 197 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 LRIF1Q5T3J3 769 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 FAM69AQ5T7M9 428 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 AGBL2Q5U5Z8 902 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 HMBOX1Q6NT76 420 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 NIPAL3Q6P499 406 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SLC2A7Q6PXP3 512 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 EPGNQ6UW88 154 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 C6orf89Q6UWU4 347 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 ZIC4Q8N9L1 334 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 WDR31Q8NA23 367 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 OR1K1Q8NGR3 316 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 FAM168AQ92567 244 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 MAL2Q969L2 176 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 UTP4Q969X6 686 aaKnown RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 BOD1Q96IK1 185 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SLC38A2Q96QD8 506 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 KATNB1Q9BVA0 655 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 C1QTNF6Q9BXI9 259 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 LINC00470Q9BZP3 86 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 C12orf10Q9HB07 376 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 YAE1D1Q9NRH1 226 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM45AQ9NWC5 275 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SELENONQ9NZV5 590 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 TESQ9UGI8 421 aaKnown RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 PMF1-BGLAPU3KQ54 211 aa7.04□□□□□ -1.28
TRAF3-205ENST00000558700 HEATR1Q9H583 2144 aaKnown RBP7.04□□□□□ -1.28
TRAF3-205ENST00000558700 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ABCA1O95477 2261 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms