RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 GPR4P46093 362 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 SELENOPP49908 381 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 SORDQ00796 357 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 POU3F1Q03052 451 aaPredicted RBP12.68□□□□□ -0.38
USP3-205ENST00000557884 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 DGCR6Q14129 220 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 POU4F3Q15319 338 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 TSPO2Q5TGU0 170 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 NIPAL3Q6P499 406 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 RRM2BQ7LG56 351 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 GABRG1Q8N1C3 465 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 ACBD4Q8NC06 268 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 DHRS1Q96LJ7 313 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 ANKRD19PQ9H560 264 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 MAGIXQ9H6Y5 334 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 PARPBPQ9NWS1 579 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 TAS2R5Q9NYW4 299 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 CRIM1Q9NZV1 1036 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 AURKCQ9UQB9 309 aa12.68□□□□□ -0.38
USP3-205ENST00000557884 DHRS12A0PJE2 317 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 TUBAL3A6NHL2 446 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 AQP12BA6NM10 295 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 EFCAB9A8MZ26 197 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 LYZL6O75951 148 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 GADD45GO95257 159 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 IGF2P01344 180 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 SAGP10523 405 aaPredicted RBP12.67□□□□□ -0.38
USP3-205ENST00000557884 AQP2P41181 271 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 MAGEA2P43356 314 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 SMIM11AP58511 58 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 PRKCDQ05655 676 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 C9orf135Q5VTT2 229 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 Q6ZT83 130 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 PIWIL3Q7Z3Z3 882 aaKnown RBP12.67□□□□□ -0.38
USP3-205ENST00000557884 AQP12AQ8IXF9 295 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 RNF113BQ8IZP6 322 aaKnown RBP12.67□□□□□ -0.38
USP3-205ENST00000557884 OR13C2Q8NGS9 318 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 MOSPD2Q8NHP6 518 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 CANT1Q8WVQ1 401 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 FAM46AQ96IP4 442 aaKnown RBP12.67□□□□□ -0.38
USP3-205ENST00000557884 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 EMC6Q9BV81 110 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 FANCFQ9NPI8 374 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 MED29Q9NX70 200 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 NOX1Q9Y5S8 564 aa12.67□□□□□ -0.38
USP3-205ENST00000557884 TRAV27A0A087WT01 109 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 LOC102725191A0A1B0GVB3 256 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 HNRNPRO43390 633 aaKnown RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 RAP2AP10114 183 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 IFNGR1P15260 489 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 IGHV1-2P23083 117 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 IL32P24001 234 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 DNAJA1P31689 397 aaKnown RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 FOXG1P55316 489 aaPredicted RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 FAPQ12884 760 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 ASRGL1Q7L266 308 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 WDFY1Q8IWB7 410 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 OR4K5Q8NGD3 323 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 OR51A7Q8NH64 312 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 ZC3HAV1LQ96H79 300 aaKnown RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 ALPK1Q96QP1 1244 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 FUZQ9BT04 418 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 MED18Q9BUE0 208 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 CHID1Q9BWS9 393 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 SLCO5A1Q9H2Y9 848 aa12.66□□□□□ -0.38
USP3-205ENST00000557884 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
USP3-205ENST00000557884 TCRBV3S1A0A5B6 114 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 SH3D21A4FU49 640 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 CDC42EP2O14613 210 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 AKAP8O43823 692 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 SLC43A1O75387 559 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 CIB2O75838 187 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 KRT33AO76009 404 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 ZNF432O94892 652 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 F13BP05160 661 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 PSMB1P20618 241 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 ZP4Q12836 540 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 PPP1R8Q12972 351 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 MELKQ14680 651 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 P2RY6Q15077 328 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 NHLRC1Q6VVB1 395 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms