RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 LINC00470Q9BZP3 86 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 MALT1Q9UDY8 824 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 KCNN3Q9UGI6 736 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 CLEC4AQ9UMR7 237 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 CENPEQ02224 2701 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 SH3PXD2BA1X283 911 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF814B7Z6K7 855 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 hCG_2039718K7EN88 272 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 HNRNPRO43390 633 aaKnown RBP12.13□□□□□ -0.47
SHMT2-234ENST00000557703 ADORA3P0DMS8 318 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 NR2C1P13056 603 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 COX6B1P14854 86 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 RRM2P31350 389 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 UQCRC1P31930 480 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 FGD3Q5JSP0 725 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 OR7E24Q6IFN5 339 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 AAED1Q7RTV5 226 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 SLC46A3Q7Z3Q1 461 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 NUFIP2Q7Z417 695 aaKnown RBP12.13□□□□□ -0.47
SHMT2-234ENST00000557703 LUZP2Q86TE4 346 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 EPHX4Q8IUS5 362 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 FAM222BQ8WU58 562 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 DUS3LQ96G46 650 aaKnown RBP12.13□□□□□ -0.47
SHMT2-234ENST00000557703 ALPK1Q96QP1 1244 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 FUZQ9BT04 418 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 CHID1Q9BWS9 393 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 MOV10Q9HCE1 1003 aaKnown RBP12.13□□□□□ -0.47
SHMT2-234ENST00000557703 CCM2LQ9NUG4 571 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-234ENST00000557703 ASB6Q9NWX5 421 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 GALNT8Q9NY28 637 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 TAS2R5Q9NYW4 299 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 HIF3AQ9Y2N7 669 aa12.13□□□□□ -0.47
SHMT2-234ENST00000557703 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 TUBAL3A6NHL2 446 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 MGRN1O60291 552 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 RAMP1O60894 148 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 ENTPD5O75356 428 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 SLC43A1O75387 559 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 IFI30P13284 250 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 COX5AP20674 150 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 UGT2B10P36537 528 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 LIMS1P48059 325 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 DAP3P51398 398 aaKnown RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 SPIBQ01892 262 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 C1orf146Q5VVC0 180 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OR2T5Q6IEZ7 315 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 PODNL1Q6PEZ8 512 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 NHLRC1Q6VVB1 395 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OAFQ86UD1 273 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 SPATA24Q86W54 205 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 ADGRG5Q8IZF4 528 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OR2T29Q8NH02 315 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 RAB3IPQ96QF0 476 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 OPN3Q9H1Y3 402 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 SLCO5A1Q9H2Y9 848 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 REEP1Q9H902 201 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-234ENST00000557703 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 RHCGQ9UBD6 479 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 UPB1Q9UBR1 384 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 V9GYQ6 96 aa12.12□□□□□ -0.47
SHMT2-234ENST00000557703 A1L4Q6 167 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ARRDC5A6NEK1 342 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF726A6NNF4 738 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 BLOC1S5-TXNDC5H3BN57 136 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 RPL36A-HNRNPH2H7BZ11 118 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 RNF13O43567 381 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 TRAF3IP2O43734 574 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF432O94892 652 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-234ENST00000557703 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-234ENST00000557703 KLK2P20151 261 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 AHCYP23526 432 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 MPGP29372 298 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 KIR2DL3P43628 341 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-234ENST00000557703 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 RPL13AP3Q6NVV1 102 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 C1orf94Q6P1W5 598 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 STAC2Q6ZMT1 411 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms