RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MDGA2Q7Z553 956 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ARIH2OSQ8N7S6 290 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 THAP4Q8WY91 577 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 NXPE2Q96DL1 559 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ARL5BQ96KC2 179 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 JSRP1Q96MG2 331 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CNN2Q99439 309 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 UTP23Q9BRU9 249 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CHST11Q9NPF2 352 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF346Q9UL40 294 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 B3GALT5Q9Y2C3 310 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CAB39Q9Y376 341 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 PCSK5Q92824 1860 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 MPDZO75970 2070 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 DAPL1A0PJW8 107 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 C12orf71A8MTZ7 269 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 G3V3Y1 287 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 SERPINI2O75830 405 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 GLCEO94923 617 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 BCL10O95999 233 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 IMPDH2P12268 514 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 IL11P20809 199 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 CNR1P21554 472 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 SRD5A2P31213 254 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 TLE3Q04726 772 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 PUDPQ08623 228 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 ACSM1Q08AH1 577 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 MYBPHQ13203 477 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 AQP6Q13520 282 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 MESTQ5EB52 335 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 FAM205BPQ63HN1 556 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 LHFPL3Q86UP9 236 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 SMPDL3BQ92485 455 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 DNAJA3Q96EY1 480 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
SHMT2-233ENST00000557529 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 DCUN1D5Q9BTE7 237 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 ASB6Q9NWX5 421 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 ANKRD10Q9NXR5 420 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 LRFN1Q9P244 771 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 SEC14L4Q9UDX3 406 aa11.24□□□□□ -0.61
SHMT2-233ENST00000557529 PCNX3Q9H6A9 2034 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 A6NIZ1 184 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 SEC14L5O43304 696 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 AKAP8O43823 692 aaKnown RBP11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ZIC3O60481 467 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 GYPBP06028 91 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 CPEP16870 476 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 NR4A1P22736 598 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 TCEA1P23193 301 aaKnown RBP11.23□□□□□ -0.61
SHMT2-233ENST00000557529 PAX7P23759 505 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 GADD45AP24522 165 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ACVR1BP36896 505 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 CD96P40200 585 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 DNASE1L1P49184 302 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 DAP3P51398 398 aaKnown RBP11.23□□□□□ -0.61
SHMT2-233ENST00000557529 SOX8P57073 446 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 RAP1BP61224 184 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 RAP1AP62834 184 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 BDH1Q02338 343 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 TPBGQ13641 420 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 GALEQ14376 348 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 RTP5Q14D33 572 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 SPCS2Q15005 226 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 TGIF1Q15583 401 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 SSX1Q16384 188 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ACKR1Q16570 336 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 B3GLCTQ6Y288 498 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ATCAYQ86WG3 371 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 TMEM99Q8N816 258 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 KBTBD8Q8NFY9 601 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF519Q8TB69 540 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 UFD1Q92890 307 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ZMYND19Q96E35 227 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-233ENST00000557529 C5orf34Q96MH7 638 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 OR5B2Q96R09 309 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 PIGQQ9BRB3 760 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF649Q9BS31 505 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 RPRD1BQ9NQG5 326 aaKnown RBP11.23□□□□□ -0.61
SHMT2-233ENST00000557529 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
SHMT2-233ENST00000557529 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms