RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 NIPSNAP2O75323 286 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 KLHL2O95198 593 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 PRAMEF12O95522 483 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 IFNA14P01570 189 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 SNRPAP09012 282 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CT45A10P0DMU9 189 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 HOXB8P17481 243 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 ACVR1BP36896 505 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 SLC1A1P43005 524 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 ALDH3B2P48448 385 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 GDI2P50395 445 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 HADHBP55084 474 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 OSTNP61366 133 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 GPNMBQ14956 572 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CYTH1Q15438 398 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 MAJINQ3KP22 176 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 FAM74A3Q4VXF1 159 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 ZCWPW2Q504Y3 356 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 TPGS2Q68CL5 300 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 NCR3LG1Q68D85 454 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 ZNF57Q68EA5 555 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 LANCL3Q6ZV70 420 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 HSD11B1LQ7Z5J1 315 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CD302Q8IX05 232 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 NATD1Q8N6N6 113 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 METTL13Q8N6R0 699 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CCNYL1Q8N7R7 359 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 OR52K1Q8NGK4 314 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 OR10T2Q8NGX3 314 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 NANPQ8TBE9 248 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 VN1R17PQ8TDU5 208 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 AGAP11Q8TF27 550 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 DDI1Q8WTU0 396 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RAPGEF5Q92565 580 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RAB7BQ96AH8 199 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 C18orf25Q96B23 403 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 TMA16Q96EY4 203 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 FOXN4Q96NZ1 517 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RPRD1AQ96P16 312 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 OLFM3Q96PB7 478 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 APOL2Q9BQE5 337 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 C9orf16Q9BUW7 83 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 TIPINQ9BVW5 301 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 TPPP3Q9BW30 176 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 HCAR1Q9BXC0 346 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CALN1Q9BXU9 219 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 NFKBIZQ9BYH8 718 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RHOJQ9H4E5 214 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 POMKQ9H5K3 350 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 MRM3Q9HC36 420 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 MRPL40Q9NQ50 206 aaKnown RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 PAQR5Q9NXK6 330 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RAB23Q9ULC3 237 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 RNF6Q9Y252 685 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 CBY1Q9Y3M2 126 aa3.54□□□□□ -1.84
PRPF39-212ENST00000557477 A0A1B0GVL5 298 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 A0A1W2PQ72 361 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 TRIM49BA6NDI0 452 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 E7ENQ6 273 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 G3V3Y1 287 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 HAS3O00219 553 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 ZBTB5O15062 677 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 RAMP1O60894 148 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 STX11O75558 287 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 SLC2A10O95528 541 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 DRD5P21918 477 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 PTBP1P26599 531 aaKnown RBP eCLIP3.53□□□□□ -1.846e-10■■■□□ 18.5
PRPF39-212ENST00000557477 IL2RGP31785 369 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 PHBP35232 272 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 HSPA9P38646 679 aaKnown RBP3.53□□□□□ -1.84
PRPF39-212ENST00000557477 SLC26A3P40879 764 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 MAGEA5P43359 124 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 DSCR10P59022 87 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 ERVPABLB-1P60509 514 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 GNGT1P63211 74 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 ELF3P78545 371 aaPredicted RBP3.53□□□□□ -1.84
PRPF39-212ENST00000557477 OTUD4Q01804 1114 aaKnown RBP3.53□□□□□ -1.84
PRPF39-212ENST00000557477 PAX2Q02962 417 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 RELAQ04206 551 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 ENPEPQ07075 957 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 PUDPQ08623 228 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 SCRN3Q0VDG4 424 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 PEX6Q13608 980 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 COTL1Q14019 142 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 MAPK6Q16659 721 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 C6orf89Q6UWU4 347 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 C4orf22Q6V702 233 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 STAC2Q6ZMT1 411 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 GCNT7Q6ZNI0 430 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 DPY19L4Q7Z388 723 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 ZNF677Q86XU0 584 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 CDH26Q8IXH8 852 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 SLC38A6Q8IZM9 456 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 OR10Z1Q8NGY1 313 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 LILRB4Q8NHJ6 448 aa3.53□□□□□ -1.84
PRPF39-212ENST00000557477 TYMSOSQ8TAI1 123 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms