RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GPR45Q9Y5Y3 372 aa12.15□□□□□ -0.46
SLIRP-210ENST00000557431 M0R3G1 203 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 RFXANKO14593 260 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 SLC43A1O75387 559 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 VAMP5O95183 116 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 HPRP00739 348 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 HLA-HP01893 362 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 HPXP02790 462 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 KITP10721 976 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 COL8A2P25067 703 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 GTF2E2P29084 291 aaKnown RBP12.14□□□□□ -0.47
SLIRP-210ENST00000557431 GRPRP30550 384 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 ANXA11P50995 505 aaKnown RBP12.14□□□□□ -0.47
SLIRP-210ENST00000557431 MAP2K6P52564 334 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 AQP5P55064 265 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 PIGFQ07326 219 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 BST1Q10588 318 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 RNF220Q5VTB9 566 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 COMTD1Q86VU5 262 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 GPR137CQ8N3F9 429 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 CLDND2Q8NHS1 167 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 MFSD8Q8NHS3 518 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 MAL2Q969L2 176 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 TAAR8Q969N4 342 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 PAIP2Q9BPZ3 127 aaKnown RBP12.14□□□□□ -0.47
SLIRP-210ENST00000557431 PIF1Q9H611 641 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
SLIRP-210ENST00000557431 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 ANP32DO95626 131 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 KRT75O95678 551 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 CD79AP11912 226 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 CRISP3P54108 245 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 STX3Q13277 289 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 C1DQ13901 141 aaKnown RBP12.13□□□□□ -0.47
SLIRP-210ENST00000557431 C3orf36Q3SXR2 165 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 OGFOD2Q6N063 350 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 DEF8Q6ZN54 512 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 STK35Q8TDR2 534 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 YIPF5Q969M3 257 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 ANKRD27Q96NW4 1050 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 OXGR1Q96P68 337 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 OR2M2Q96R28 347 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 SPATA9Q9BWV2 254 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 TPT1P8Q9HAU6 139 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 HAO1Q9UJM8 370 aa12.13□□□□□ -0.47
SLIRP-210ENST00000557431 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-210ENST00000557431 IGKV1D-42A0A075B6H8 117 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 LRRN3E7EW58 273 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 BIRC5O15392 142 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 RGS16O15492 202 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 TRAF3IP2O43734 574 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 SERPINI2O75830 405 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 NCR1O76036 304 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 ERCC1P07992 297 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 HTR2AP28223 471 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 LARS2Q15031 903 aaKnown RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF311Q5JNZ3 666 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 C1QTNF12Q5T7M4 302 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 NXNQ6DKJ4 435 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 TMEM123Q8N131 208 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 HPS1Q92902 700 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
SLIRP-210ENST00000557431 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 KCNK9Q9NPC2 374 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 MED29Q9NX70 200 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 RCE1Q9Y256 329 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF99A8MXY4 864 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-210ENST00000557431 M0R233 179 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 AIM2O14862 343 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 PATE4P0C8F1 98 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 B4GALT1P15291 398 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 ARR3P36575 388 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 GPR6P46095 362 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-210ENST00000557431 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 TNFAIP8L3Q5GJ75 292 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 CEP85LQ5SZL2 805 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 C10orf111Q8N326 155 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 TXNDC15Q96J42 360 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF75AQ96N20 296 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 HIF1ANQ9NWT6 349 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 B3GNT2Q9NY97 397 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF224Q9NZL3 707 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 CALML5Q9NZT1 146 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms