RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MBL2P11226 248 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 ETS1P14921 441 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PGAM1P18669 254 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 HLA-DPA1P20036 260 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 GABRR2P28476 465 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 GCAP28676 217 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 OAS2P29728 719 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 OR1E1P30953 314 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 IL2RGP31785 369 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CASP3P42574 277 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TRPC1P48995 793 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SERPINB9P50453 376 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 EFNA3P52797 238 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ARPP19P56211 112 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 GPX6P59796 221 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 KRTAP10-10P60014 251 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RPL26P61254 145 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 MRPS25P82663 173 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 ACVR1Q04771 509 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 AP1B1Q10567 949 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CDH17Q12864 832 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PDIA2Q13087 525 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 MSLNQ13421 630 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 GPM6BQ13491 265 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PRPSAP1Q14558 356 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SHHQ15465 462 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 OR1C1Q15619 314 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ZNF77Q15935 545 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SGCBQ16585 318 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 MPPE1Q53F39 396 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TTMPQ5BVD1 217 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SPANXN3Q5MJ09 141 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ANKRD22Q5VYY1 191 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SLC22A10Q63ZE4 541 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RWDD4Q6NW29 188 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 KDELC1Q6UW63 502 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 APOOLQ6UXV4 268 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 Q6ZRG5 221 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RGS9BPQ6ZS82 235 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PID1Q7Z2X4 250 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TMCO2Q7Z6W1 182 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 SLC26A11Q86WA9 606 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 LRRC6Q86X45 466 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CNTN4Q8IWV2 1026 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CMTM8Q8IZV2 173 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RNF175Q8N4F7 328 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SIDT2Q8NBJ9 832 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 CCNYQ8ND76 341 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 VN1R2Q8NFZ6 395 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CCDC110Q8TBZ0 833 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 DTX3LQ8TDB6 740 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ST7LQ8TDW4 575 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ACMSDQ8TDX5 336 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PYROXD1Q8WU10 500 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 UBTD2Q8WUN7 234 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ARNTL2Q8WYA1 636 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 FAM46BQ96A09 425 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ZNF707Q96C28 371 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 C5orf30Q96GV9 206 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RPRD1AQ96P16 312 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 LYSMD1Q96S90 227 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CYTH2Q99418 400 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 KIFC1Q9BW19 673 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 NUSAP1Q9BXS6 441 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 POLR1EQ9GZS1 481 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 NACA2Q9H009 215 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TREX1Q9NSU2 369 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ZCCHC3Q9NUD5 404 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 BFARQ9NZS9 450 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 COX16Q9P0S2 106 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PSMC3IPQ9P2W1 217 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 VANGL2Q9ULK5 521 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 RPL26L1Q9UNX3 145 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 FOXA2Q9Y261 457 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 HS3ST2Q9Y278 367 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PPIL1Q9Y3C6 166 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 MFHAS1Q9Y4C4 1052 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 OR51B4Q9Y5P0 310 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 PRUNE2Q8WUY3 3088 aa2.59□□□□□ -2
VRK1-207ENST00000557352 NINQ8N4C6 2090 aa2.59□□□□□ -2
VRK1-207ENST00000557352 SZT2Q5T011 3432 aa2.58□□□□□ -2
VRK1-207ENST00000557352 THADAQ6YHU6 1953 aa2.58□□□□□ -2
VRK1-207ENST00000557352 IQANK1A0A1B0GTG1 560 aa2.58□□□□□ -2
VRK1-207ENST00000557352 EXOC1LA0A1B0GW35 172 aa2.58□□□□□ -2
VRK1-207ENST00000557352 HEATR9A2RTY3 570 aa2.58□□□□□ -2
VRK1-207ENST00000557352 WASH3PC4AMC7 463 aa2.58□□□□□ -2
VRK1-207ENST00000557352 KCNK1O00180 336 aa2.58□□□□□ -2
VRK1-207ENST00000557352 DFFAO00273 331 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TM9SF1O15321 606 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RGS16O15492 202 aaPredicted RBP2.58□□□□□ -2
VRK1-207ENST00000557352 NUDT21O43809 227 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 CD160O95971 181 aa2.58□□□□□ -2
VRK1-207ENST00000557352 PNPP00491 289 aa2.58□□□□□ -2
VRK1-207ENST00000557352 IL1BP01584 269 aa2.58□□□□□ -2
VRK1-207ENST00000557352 JCHAINP01591 159 aa2.58□□□□□ -2
VRK1-207ENST00000557352 SHBGP04278 402 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RHOCP08134 193 aa2.58□□□□□ -2
VRK1-207ENST00000557352 GSTA1P08263 222 aa2.58□□□□□ -2
VRK1-207ENST00000557352 SERPINF2P08697 491 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CT45A8P0DMV1 189 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms