RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ARAFP10398 606 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 PPIBP23284 216 aaKnown RBP13.8□□□□□ -0.2
TUBB3-213ENST00000557262 GRPRP30550 384 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 CALCRP30988 508 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 NR4A2P43354 598 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 GZMKP49863 264 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 CDK6Q00534 326 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 EFNB3Q15768 340 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 ALG10BQ5I7T1 473 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 REEP3Q6NUK4 255 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 ULK3Q6PHR2 472 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 VHLLQ6RSH7 139 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 KRT73Q86Y46 540 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 CCDC36Q8IYA8 594 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 PIK3C3Q8NEB9 887 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF417Q8TAU3 575 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 SLC47A1Q96FL8 570 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 C7orf26Q96N11 449 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 FOXN4Q96NZ1 517 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF587Q96SQ5 575 aaPredicted RBP13.8□□□□□ -0.2
TUBB3-213ENST00000557262 PIMREGQ9BSJ6 248 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 PLK3Q9H4B4 646 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 FBXO9Q9UK97 447 aaPredicted RBP13.8□□□□□ -0.2
TUBB3-213ENST00000557262 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 STAB1Q9NY15 2570 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 MS4A18H0YCH9 400 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 AKAP8O43823 692 aaKnown RBP13.79□□□□□ -0.2
TUBB3-213ENST00000557262 TPST1O60507 370 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 HTR2AP28223 471 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 ARR3P36575 388 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 IDH3AP50213 366 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 HGFACQ04756 655 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 GGTLC2Q14390 218 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 MFSD13AQ14CX5 517 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 MS4A18Q3C1V0 323 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 PAGE3Q5JUK9 113 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-213ENST00000557262 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 NUP37Q8NFH4 326 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 OR6S1Q8NH40 331 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 SPDL1Q96EA4 605 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF837Q96EG3 531 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-213ENST00000557262 OR2M2Q96R28 347 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 CCDC28BQ9BUN5 200 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 PRR14Q9BWN1 585 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 SHARPINQ9H0F6 387 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 TMEM27Q9HBJ8 222 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 CRLF2Q9HC73 371 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 SLC52A3Q9NQ40 469 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 SELENONQ9NZV5 590 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 CCDC167Q9P0B6 97 aa13.79□□□□□ -0.2
TUBB3-213ENST00000557262 IGKV1D-42A0A075B6H8 117 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 A0A087WUJ7 227 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 PRORSD1PA6NEY8 169 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF16P17020 682 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-213ENST00000557262 GPX2P18283 190 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 CBLP22681 906 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 PPOXP50336 477 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 IDH3GP51553 393 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-213ENST00000557262 CARTPTQ16568 116 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 COMTD1Q86VU5 262 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 C10orf111Q8N326 155 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF540Q8NDQ6 660 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 ADPRHL1Q8NDY3 354 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-213ENST00000557262 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 SLC41A3Q96GZ6 507 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF607Q96SK3 696 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 EPYCQ99645 322 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 DOK1Q99704 481 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 EBF4Q9BQW3 602 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 TMEM38AQ9H6F2 299 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF442Q9H7R0 627 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 CORO2BQ9UQ03 480 aa13.78□□□□□ -0.2
TUBB3-213ENST00000557262 LOC100289279A0A1B0GTE1 492 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF99A8MXY4 864 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 EVPLLA8MZ36 301 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 PHF1O43189 567 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 TRAF3IP2O43734 574 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 SERPINB7O75635 380 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 CELA3BP08861 270 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 APEHP13798 732 aaKnown RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 NQO1P15559 274 aaKnown RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 NPR2P20594 1047 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 SLC6A2P23975 617 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms