RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FUT7Q11130 342 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 COTL1Q14019 142 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KIR2DS3Q14952 304 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KIR2DS5Q14953 304 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RBMS2Q15434 407 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 MLF2Q15773 248 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 SSX2Q16385 188 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 PCK2Q16822 640 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 HKDC1Q2TB90 917 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ADPRMQ3LIE5 342 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SPANXN2Q5MJ10 180 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TRIM40Q6P9F5 258 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 BHLHB9Q6PI77 547 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ERASQ7Z444 233 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 HIPK1Q86Z02 1210 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 MSRB3Q8IXL7 192 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SLC7A5P1Q8MH63 180 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 UBE2J2Q8N2K1 259 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 GPR137CQ8N3F9 429 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 DHRSXQ8N5I4 330 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 LMNTD1Q8N9Z9 388 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR7A2PQ8NGA2 310 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR4N2Q8NGD1 307 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR9K2Q8NGE7 335 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR4A15Q8NGL6 344 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR2A1Q8NGT9 310 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 CDC26Q8NHZ8 85 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TSEN15Q8WW01 171 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 LCN9Q8WX39 176 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ADAMTS14Q8WXS8 1223 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR5P2Q8WZ92 322 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 LZICQ8WZA0 190 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KLK6Q92876 244 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OSTF1Q92882 214 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ZBED6CLQ96FA7 236 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 SLC47A1Q96FL8 570 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 PYURFQ96I23 114 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 FAM71F1Q96KD3 344 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 IL17FQ96PD4 163 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 CHID1Q9BWS9 393 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TM2D2Q9BX73 214 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 EBPLQ9BY08 206 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 GSDMCQ9BYG8 508 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 NLNQ9BYT8 704 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 MAGT1Q9H0U3 335 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR51B5Q9H339 312 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TMEM38AQ9H6F2 299 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RPF2Q9H7B2 306 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 DDX31Q9H8H2 851 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 TPT1P8Q9HAU6 139 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 NEK6Q9HC98 313 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 APMAPQ9HDC9 416 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ACSS1Q9NUB1 689 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 POT1Q9NUX5 634 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RDH8Q9NYR8 311 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TAS2R9Q9NYW1 312 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SLC25A37Q9NYZ2 338 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SH3GLB1Q9Y371 365 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ORC6Q9Y5N6 252 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 HEATR5BQ9P2D3 2071 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 A0A1W2PPV9 198 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TMEM129A0AVI4 362 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SOCS2O14508 198 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 PRYO14603 147 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZW10O43264 779 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ETHE1O95571 254 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CST1P01037 141 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 C9P02748 559 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 KLK1P06870 262 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LYNP07948 512 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LAMP1P11279 417 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ETFAP13804 333 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CTSEP14091 401 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 NCK1P16333 377 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZNF23P17027 643 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ITGA2P17301 1181 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SRD5A1P18405 259 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TACR3P29371 465 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 NTSP30990 170 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 KDELR2P33947 212 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CHI3L1P36222 383 aaPredicted RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 DLSTP36957 453 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 HTR2BP41595 481 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ACTR1BP42025 376 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SSR2P43308 183 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 GZMMP51124 257 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SSTP61278 116 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CSNK2BP67870 215 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CSNK1G2P78368 415 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SELPLGQ14242 412 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 GNA13Q14344 377 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 RGNQ15493 299 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CARTPTQ16568 116 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZNF630Q2M218 657 aaPredicted RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 MANEAQ5SRI9 462 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TMEM268Q5VZI3 342 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TTC23Q5W5X9 447 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LYSMD4Q5XG99 296 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 FAM219BQ5XKK7 198 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 AWAT2Q6E213 333 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms