RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DNAJA4Q8WW22 397 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 RERGQ96A58 199 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 MS4A6EQ96DS6 147 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 MARS2Q96GW9 593 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SAMD8Q96LT4 415 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 HS6ST2Q96MM7 605 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LRFN5Q96NI6 719 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR2M4Q96R27 311 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SERINC2Q96SA4 455 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ATF6BQ99941 703 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 IFT27Q9BW83 186 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 HDHD5Q9BXW7 423 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 PLA2G12AQ9BZM1 189 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SLITRK2Q9H156 845 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ABCG4Q9H172 646 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SLC38A1Q9H2H9 487 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LINC00597Q9H2U6 94 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR52D1Q9H346 318 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LRRN3Q9H3W5 708 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 RANBP3Q9H6Z4 567 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SFXN1Q9H9B4 322 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM27Q9HBJ8 222 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 MAN2C1Q9NTJ4 1040 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 MCUBQ9NWR8 336 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 QPCTLQ9NXS2 382 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 NLKQ9UBE8 527 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 RPS6KB2Q9UBS0 482 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SLC7A7Q9UM01 511 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 KCNK6Q9Y257 313 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 EXOGQ9Y2C4 368 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TMA7Q9Y2S6 64 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 HSPB11Q9Y547 144 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CACNG2Q9Y698 323 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CSNK1G3Q9Y6M4 447 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CLCA3PQ9Y6N3 262 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SESN1Q9Y6P5 492 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LAMA5O15230 3695 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 MYO9AB2RTY4 2548 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 EML5Q05BV3 1969 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 MTCL1Q9Y4B5 1905 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 LOC102723532A0A0G2JNH3 316 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1B0GVI7 797 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1B0GW55 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1W2PPV9 198 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1W2PQ72 361 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SYNDIG1LA6NDD5 238 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 IGLON5A6NGN9 336 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 LRRC72A6NJI9 287 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 A6NL46 340 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 FLRT2O43155 660 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 LRRTM2O43300 516 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 EEF1E1O43324 174 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 FRS3O43559 492 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SSNA1O43805 119 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 PIP5K1CO60331 668 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 FMO6PO60774 539 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 PRAF2O60831 178 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF780AO75290 641 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 PRKRAO75569 313 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SNAPC5O75971 98 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SOX30O94993 753 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 CRYZL1O95825 349 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 ECDO95905 644 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 IFNA7P01567 189 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 AMY1AP04745 511 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 IFNA16P05015 189 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 ADRA2AP08913 450 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 CISD3P0C7P0 127 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L2P0CJ85 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L3P0CJ86 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L4P0CJ87 422 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L5P0CJ88 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L6P0CJ89 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 DUX4L7P0CJ90 424 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 LIMS3P0CW19 117 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 LIMS4P0CW20 117 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 C8orf89P0DMQ9 161 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 CHRNB1P11230 501 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 TDGF1P13385 188 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 RAB3BP20337 219 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 NT5EP21589 574 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 C5AR1P21730 350 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 FAUP35544 74 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 PTH2RP49190 550 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 TGM4P49221 684 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 PDX1P52945 283 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 CAV3P56539 151 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SCAND1P57086 179 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 NXPH1P58417 271 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 RAB8AP61006 207 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SRP54P61011 504 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SKP1P63208 163 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 RPS21P63220 83 aaKnown RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 POU6F2P78424 691 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-241ENST00000556374 NTHL1P78549 312 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 HOXC5Q00444 222 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 SLC3A1Q07837 685 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 FUT5Q11128 374 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 TNK1Q13470 666 aa4.02□□□□□ -1.77
ATXN3-241ENST00000556374 MADCAM1Q13477 382 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms