RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GCNT2Q8N0V5 402 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 RPRMLQ8N4K4 120 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 MARVELD2Q8N4S9 558 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 LRRC17Q8N6Y2 441 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 ATG16L2Q8NAA4 619 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 AQP11Q8NBQ7 271 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 OR9K2Q8NGE7 335 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 OR52L1Q8NGH7 329 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 OR13C2Q8NGS9 318 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 OR51A7Q8NH64 312 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 CA5BP1Q8WTZ4 195 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 LRTOMTQ8WZ04 291 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 APH1AQ96BI3 265 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 PSD2Q9BQI7 771 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 DGCR6LQ9BY27 220 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 INIPQ9NRY2 104 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 KIF17Q9P2E2 1029 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 Q9UFV3 132 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 ENOPH1Q9UHY7 261 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 CLEC4AQ9UMR7 237 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 PROCRQ9UNN8 238 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 RNF6Q9Y252 685 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 RCE1Q9Y256 329 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 HIF3AQ9Y2N7 669 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 NOSIPQ9Y314 301 aaKnown RBP6.8□□□□□ -1.32
TDP1-214ENST00000556063 FLVCR1Q9Y5Y0 555 aa6.8□□□□□ -1.32
TDP1-214ENST00000556063 NPIPB13A6NJU9 1138 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 KDM4EB2RXH2 506 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 ZNF814B7Z6K7 855 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 NPIPB4C9JG80 1138 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 MCIDASD6RGH6 385 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 MS4A18H0YCH9 400 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 H3BNX3 289 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 MSTNO14793 375 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 ZG16O60844 167 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 SERPINI2O75830 405 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-214ENST00000556063 KRT33AO76009 404 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CNOT4O95628 575 aaKnown RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 BCL10O95999 233 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CD8BP10966 210 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 NR2C1P13056 603 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 BMP5P22003 454 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 FUT4P22083 530 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 AGTR1P30556 359 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 SLC6A6P31641 620 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 UQCRC1P31930 480 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 AQP2P41181 271 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 KIR2DL2P43627 348 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 P2RY4P51582 365 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 IST1P53990 364 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CLDN17P56750 224 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 RPS4XP62701 263 aaKnown RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-214ENST00000556063 ADORA2A-AS1P86434 159 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 POU3F1Q03052 451 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 RPL18Q07020 188 aaKnown RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 FOXF2Q12947 444 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 PPP1R8Q12972 351 aaKnown RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 MS4A18Q3C1V0 323 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 FAM205BPQ63HN1 556 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 GPR139Q6DWJ6 353 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 PGBD2Q6P3X8 592 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 PLXDC2Q6UX71 529 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CASP12Q6UXS9 341 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 CREB3L2Q70SY1 520 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 ABHD12BQ7Z5M8 362 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 CCDC71Q8IV32 467 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 PQLC1Q8N2U9 271 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 KDM8Q8N371 416 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 POMGNT2Q8NAT1 580 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 ICA1LQ8NDH6 482 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 OR9Q2Q8NGE9 314 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 LILRB4Q8NHJ6 448 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 TMEM45BQ96B21 275 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 ADAD1Q96M93 576 aaKnown RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 TNFRSF13CQ96RJ3 184 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 FEVQ99581 238 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 TEX12Q9BXU0 123 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 UCK2Q9BZX2 261 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 DCLRE1BQ9H816 532 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 NTN4Q9HB63 628 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 KCNJ16Q9NPI9 418 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 PLSCR4Q9NRQ2 329 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 VNN3Q9NY84 501 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 TAS2R5Q9NYW4 299 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
TDP1-214ENST00000556063 SIGLEC7Q9Y286 467 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 ORC6Q9Y5N6 252 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 BOD1L1Q8NFC6 3051 aa6.79□□□□□ -1.32
TDP1-214ENST00000556063 DOPEY1Q5JWR5 2465 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 LRRK2Q5S007 2527 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TRAV27A0A087WT01 109 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 A6NIZ1 184 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CENPBD1B2RD01 187 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 EEF1E1-BLOC1S5C9J1V9 151 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 PYCARD-AS1I3L0S3 204 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms