RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AUNIPQ9H7T9 357 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LIN7BQ9HAP6 207 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PLEKHA1Q9HB21 404 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NKIRAS2Q9NYR9 191 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LRIT1Q9P2V4 623 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PRODH2Q9UF12 536 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ERVK-19Q9WJR5 959 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 RCE1Q9Y256 329 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 DTX4Q9Y2E6 619 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ETV7Q9Y603 341 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 FKBP7Q9Y680 259 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 U3KQ87 197 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ANXA2P2A6NMY6 339 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ACOT7O00154 380 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 HRKO00198 91 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SCDO00767 359 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SNAPC5O75971 98 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SLC22A5O76082 557 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZNF432O94892 652 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZFPL1O95159 310 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LDOC1O95751 146 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 TGM6O95932 706 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 IGF2P01344 180 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 HIST1H2ABP04908 130 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ANXA2P07355 339 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 CD14P08571 375 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ANKRD34CP0C6C1 535 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CT45A8P0DMV1 189 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CT45A9P0DMV2 189 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 UBL4AP11441 157 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 APEHP13798 732 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 POU3F3P20264 500 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 GRPRP30550 384 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LCN1P31025 176 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 UQCRC1P31930 480 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NUDT1P36639 197 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 GPR3P46089 330 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PPM1FP49593 454 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 BLKP51451 505 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZNF81P51508 661 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ART1P52961 327 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SLC25A1P53007 311 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 RAB14P61106 215 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 IGLV3-21P80748 117 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 Q499Y3 187 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 GXYLT1Q4G148 440 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ALG10Q5BKT4 473 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CT45A2Q5DJT8 189 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TMEM31Q5JXX7 168 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ELFN2Q5R3F8 820 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 MTFR2Q6P444 385 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 FAM199XQ6PEV8 388 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 HIST3H2AQ7L7L0 130 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ELMOD2Q8IZ81 293 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TDHQ8IZJ6 230 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 AVL9Q8NBF6 648 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LSM14AQ8ND56 463 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZNF680Q8NEM1 530 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR2T4Q8NH00 348 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 C16orf52Q8NHV5 167 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 RPS4Y2Q8TD47 263 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 HMGB4Q8WW32 186 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NSMAFQ92636 917 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 HIST1H2ACQ93077 130 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TCTN2Q96GX1 697 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ADAD1Q96M93 576 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 ORAI3Q9BRQ5 295 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZNF436Q9C0F3 470 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 COMMD4Q9H0A8 199 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 S1PR5Q9H228 398 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 GPN1Q9HCN4 374 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NANSQ9NR45 359 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 UBQLN4Q9NRR5 601 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SLCO1C1Q9NYB5 712 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TAS2R10Q9NYW0 307 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 EIF3KQ9UBQ5 218 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 GRHPRQ9UBQ7 328 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ELF5Q9UKW6 265 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 COPS3Q9UNS2 423 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 PIAS3Q9Y6X2 628 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 A0A1B0GUH1 482 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 TTLL8A6PVC2 850 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 B4DGG1 531 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 TGFBR3LH3BV60 316 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 PSMD9O00233 223 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 IMPA2O14732 288 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 HCRTR1O43613 425 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 RPP14O95059 124 aaKnown RBP6.38□□□□□ -1.39
TDP1-213ENST00000555880 NSA2O95478 260 aaKnown RBP6.38□□□□□ -1.39
TDP1-213ENST00000555880 CRYZL1O95825 349 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 RENP00797 406 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 MAOAP21397 527 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 DPP4P27487 766 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 SDHAP31040 664 aa6.38□□□□□ -1.39
TDP1-213ENST00000555880 FAUP35544 74 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms