RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 LYPD4Q6UWN0 246 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 TMPPEQ6ZT21 453 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 CXXC5Q7LFL8 322 aaKnown RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 OR51G2Q8NGK0 314 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZPLD1Q8TCW7 415 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 GATA6Q92908 595 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 SMAD5Q99717 465 aaKnown RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZNF426Q9BUY5 554 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 HINT3Q9NQE9 182 aaKnown RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 SNX5Q9Y5X3 404 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 POLEQ07864 2286 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 A0A1W2PRG6 482 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 SLC1A7O00341 560 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 FADS2O95864 444 aaKnown RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 C21orf33P30042 268 aaPredicted RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 AGFG1P52594 562 aaKnown RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 CDH11P55287 796 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 CTBP2P56545 445 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 LY6DQ14210 128 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 ZNF169Q14929 603 aaPredicted RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 ALKBH2Q6NS38 261 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 SPATC1Q76KD6 591 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 OR10D3Q8NH80 312 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 PRRG3Q9BZD7 231 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 SYT4Q9H2B2 425 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 ZNF703Q9H7S9 590 aaPredicted RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 N6AMT1Q9Y5N5 214 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 ARRDC5A6NEK1 342 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 LIPT2A6NK58 231 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 PTP4A3O75365 173 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 IFNGP01579 166 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 PAICSP22234 425 aaKnown RBP9.15□□□□□ -0.94
NEK9-205ENST00000555405 MAP2K4P45985 399 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 RPS6KA3P51812 740 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 HCCSP53701 268 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 BIDP55957 195 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 PRPS1P60891 318 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 RAC1P63000 192 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 ITGADQ13349 1161 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 APOFQ13790 326 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 KEAP1Q14145 624 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 RHOXF1Q8NHV9 184 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 STK35Q8TDR2 534 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 TUBA1CQ9BQE3 449 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 SEC61A2Q9H9S3 476 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 FKRPQ9H9S5 495 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 TAS2R5Q9NYW4 299 aa9.15□□□□□ -0.94
NEK9-205ENST00000555405 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.15□□□□□ -0.94
NEK9-205ENST00000555405 ZNF726A6NNF4 738 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 PSMD9O00233 223 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 KLF4O43474 513 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 CD14P08571 375 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 ZNF3P17036 446 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 CLDN17P56750 224 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 CDK5Q00535 292 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 MVKQ03426 396 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 ZNF585AQ6P3V2 769 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 SLC35D2Q76EJ3 337 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 MCEMP1Q8IX19 187 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 PM20D2Q8IYS1 436 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 ARMC10Q8N2F6 343 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 FNDC9Q8TBE3 224 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 ZHX1-C8orf76Q96EF9 292 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 COPS4Q9BT78 406 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 SLC19A3Q9BZV2 496 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 CHST11Q9NPF2 352 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 B3GNT3Q9Y2A9 372 aa9.15□□□□□ -0.95
NEK9-205ENST00000555405 PRR14LQ5THK1 2151 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 A0A087WZY1 265 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 WBP4O75554 376 aaKnown RBP9.14□□□□□ -0.95
NEK9-205ENST00000555405 CDKN2AP42771 156 aaKnown RBP9.14□□□□□ -0.95
NEK9-205ENST00000555405 RUNX1T1Q06455 604 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.14□□□□□ -0.95
NEK9-205ENST00000555405 KRR1Q13601 381 aaKnown RBP9.14□□□□□ -0.95
NEK9-205ENST00000555405 PON3Q15166 354 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 LHFPL3Q86UP9 236 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 UEVLDQ8IX04 471 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ZNF511Q8NB15 262 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 PROKR2Q8NFJ6 384 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 OR4F15Q8NGB8 312 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 OR6N1Q8NGY5 312 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 OIT3Q8WWZ8 545 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 SRXN1Q9BYN0 137 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 CALHM2Q9HA72 323 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 WARS2Q9UGM6 360 aaKnown RBP9.14□□□□□ -0.95
NEK9-205ENST00000555405 TPRKBQ9Y3C4 175 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ICE1Q9Y2F5 2266 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 A0A1B0GTH9 108 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 PLPP3O14495 311 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 SLC16A7O60669 478 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 CLPTM1O96005 669 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 TPOP07202 933 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ASAH2BP0C7U1 165 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 NR4A1P22736 598 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms