RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GCNT2Q8N0V5 402 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 SVOPLQ8N434 492 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 OR9Q2Q8NGE9 314 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 LILRB4Q8NHJ6 448 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ASB5Q8WWX0 329 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 TMEM45BQ96B21 275 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 STARD4Q96DR4 205 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 FEVQ99581 238 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 COQ3Q9NZJ6 369 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 JKAMPQ9P055 326 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 PDP1Q9P0J1 537 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 C6orf203Q9P0P8 240 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 MED12LQ86YW9 2145 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 HIVEP3Q5T1R4 2406 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 UNC119BA6NIH7 251 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 NPIPB13A6NJU9 1138 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 NPIPB4C9JG80 1138 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 G3V2T6 193 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 TRAF3IP2O43734 574 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 OR6A2O95222 327 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ADAP00813 363 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 CD8BP10966 210 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 HLA-DOBP13765 273 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF26P17031 533 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 GSTM3P21266 225 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 AHCYP23526 432 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 AQP2P41181 271 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 BTLAQ7Z6A9 289 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 GPAT4Q86UL3 456 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 CCDC71Q8IV32 467 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 UEVLDQ8IX04 471 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 HS3ST5Q8IZT8 346 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 PQLC1Q8N2U9 271 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF808Q8N4W9 903 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 AQP11Q8NBQ7 271 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 OR51A7Q8NH64 312 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ITLN2Q8WWU7 325 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 STMN2Q93045 179 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF385AQ96PM9 386 aaKnown RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 OSBPL10Q9BXB5 764 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 PIGMQ9H3S5 423 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 MCCC2Q9HCC0 563 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 PARPBPQ9NWS1 579 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 IL20Q9NYY1 176 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 CLEC4AQ9UMR7 237 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 EMC9Q9Y3B6 208 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-219ENST00000555323 DOCK7Q96N67 2140 aa11.26□□□□□ -0.61
SYNE2-219ENST00000555323 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 DVL2O14641 736 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF432O94892 652 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 CNOT4O95628 575 aaKnown RBP11.25□□□□□ -0.61
SYNE2-219ENST00000555323 PRKACGP22612 351 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 PCYT1AP49585 367 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 TAF11Q15544 211 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 RFX4Q33E94 735 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 ALG10Q5BKT4 473 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 RPL13AP3Q6NVV1 102 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 NUFIP2Q7Z417 695 aaKnown RBP11.25□□□□□ -0.61
SYNE2-219ENST00000555323 MRGPRGQ86SM5 289 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 FAM26EQ8N5C1 309 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 CLDN22Q8N7P3 220 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 OR13C2Q8NGS9 318 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 MOSPD2Q8NHP6 518 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 DNAJC9Q8WXX5 260 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 SDCCAG3Q96C92 435 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 GPX7Q96SL4 187 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-219ENST00000555323 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 GABARAPL1Q9H0R8 117 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 INIPQ9NRY2 104 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
SYNE2-219ENST00000555323 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
SYNE2-219ENST00000555323 MAGED1Q9Y5V3 778 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-219ENST00000555323 A8MXE2 369 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 C11orf98E9PRG8 122 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 MSTNO14793 375 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 RNF13O43567 381 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 ZG16O60844 167 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 MRPL33O75394 65 aaKnown RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 NDUFB2O95178 105 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 IGHMP01871 453 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 TP53P04637 393 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 F13BP05160 661 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 POU2F1P14859 743 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 OR3A2P47893 321 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 C1DQ13901 141 aaKnown RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 SLC25A35Q3KQZ1 300 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 FBXL19-AS1Q494R0 122 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 SMARCD3Q6STE5 483 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms