RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ZNF396Q96N95 335 aaPredicted RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 FOXN4Q96NZ1 517 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 XPO6Q96QU8 1125 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 CYP2S1Q96SQ9 504 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 CHID1Q9BWS9 393 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 CLEC7AQ9BXN2 247 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 NAT10Q9H0A0 1025 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 OR52A5Q9H2C5 316 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 DEPPQ9NTK1 212 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PAK1IP1Q9NWT1 392 aaPredicted RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 ADA2Q9NZK5 511 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TP53TG3Q9ULZ0 132 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PPP1R3CQ9UQK1 317 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 MYO3BQ8WXR4 1341 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 AK9Q5TCS8 1911 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 PLEKHH1Q9ULM0 1364 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 ARHGEF33A8MVX0 844 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 K7EQD1 137 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 SCAMP2O15127 329 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 PI15O43692 258 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 NIPSNAP2O75323 286 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 IFNW1P05000 195 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 ALDOBP05062 364 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 NR2C1P13056 603 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 HOXB8P17481 243 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 DDOSTP39656 456 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 VHLP40337 213 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 OPRL1P41146 370 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 KPNA2P52292 529 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 MFAP2P55001 183 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 RND3P61587 244 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 PSMC5P62195 406 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 MRPS22P82650 360 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 IL18R1Q13478 541 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 KIAA0141Q14154 515 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 OXA1LQ15070 435 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 CYTH1Q15438 398 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 CYP51A1Q16850 503 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 DGUOKQ16854 277 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 C18orf21Q32NC0 220 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 EIPR1Q53HC9 387 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 C2CD6Q53TS8 623 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 VWA2Q5GFL6 755 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 MS4A13Q5J8X5 152 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 PPM1LQ5SGD2 360 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 REP15Q6BDI9 236 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 LRRTM1Q86UE6 522 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 APOBEC3FQ8IUX4 373 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 SELENOHQ8IZQ5 122 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 INO80EQ8NBZ0 244 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 FBXL13Q8NEE6 735 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 OR52B6Q8NGF0 335 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 OR56A4Q8NGH8 313 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 NABP1Q96AH0 204 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 ZNF317Q96PQ6 595 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 TMEM165Q9HC07 324 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 FGF20Q9NP95 211 aaPredicted RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 THUMPD1Q9NXG2 353 aaKnown RBP4.19□□□□□ -1.74
VRK1-203ENST00000555067 ZNF229Q9UJW7 825 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 POFUT2Q9Y2G5 429 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 MOB4Q9Y3A3 225 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 USP6P35125 1406 aa4.19□□□□□ -1.74
VRK1-203ENST00000555067 BRD4O60885 1362 aaPredicted RBP4.18□□□□□ -1.74
VRK1-203ENST00000555067 TRPC5OSA6NMA1 111 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 A8MUA0 341 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 NDUFAB1O14561 156 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 GOSR2O14653 212 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 GMDSO60547 372 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 CDK14O94921 469 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 HOXD4P09016 255 aaPredicted RBP4.18□□□□□ -1.74
VRK1-203ENST00000555067 PMCHP20382 165 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 UGT1A4P22310 534 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 PDHA2P29803 388 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 LEPP41159 167 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 SLC1A1P43005 524 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 NPBWR2P48146 333 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 CCNHP51946 323 aaPredicted RBP4.18□□□□□ -1.74
VRK1-203ENST00000555067 ARHGDIAP52565 204 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 UBE2MP61081 183 aaKnown RBP4.18□□□□□ -1.74
VRK1-203ENST00000555067 GSTO1P78417 241 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 VLDLRP98155 873 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 LRRC63Q05C16 580 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 UPP1Q16831 310 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 HLA-BQ31612 363 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 SLC22A6Q4U2R8 563 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 CLEC6AQ6EIG7 209 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 ZNF774Q6NX45 483 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 ULK3Q6PHR2 472 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 C3P1Q6ZMU1 363 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 Q6ZRP5 223 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 PGAP1Q75T13 922 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 CMTM1Q8IZ96 169 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 IQCKQ8N0W5 287 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 ARHGAP18Q8N392 663 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 TTC29Q8NA56 475 aaPredicted RBP4.18□□□□□ -1.74
VRK1-203ENST00000555067 OR10H4Q8NGA5 316 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 OR4D6Q8NGJ1 314 aa4.18□□□□□ -1.74
VRK1-203ENST00000555067 OR10G7Q8NGN6 311 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms