RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SDHAF2Q9NX18 166 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 FOLR3P41439 243 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 CCR9P51686 369 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 MFGE8Q08431 387 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ASAH1Q13510 395 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 DEFB133Q30KQ1 61 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 FAM26DQ5JW98 314 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 KLHDC8BQ8IXV7 354 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 FGF13Q92913 245 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 GABARAPL3Q9BY60 117 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 C1orf123Q9NWV4 160 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 A0A1B0GWA3 101 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 CD79AP11912 226 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 NPPBP16860 134 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 MMP11P24347 488 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 DEFB103AP81534 67 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ZMAT1Q5H9K5 638 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 PLCXD3Q63HM9 321 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 BCDIN3DQ7Z5W3 292 aaKnown RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 SLC35B4Q969S0 331 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ARRDC3Q96B67 414 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 SLCO4A1Q96BD0 722 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ZIC5Q96T25 663 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 NMNAT3Q96T66 252 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 STEAP1Q9UHE8 339 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 TACR3P29371 465 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 S100A11P31949 105 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 TMPRSS7Q7RTY8 843 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 MITD1Q8WV92 249 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 LURAP1Q96LR2 239 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 CMSS1Q9BQ75 279 aaKnown RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 TAAR2Q9P1P5 351 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 SUSD5O60279 629 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 F11P03951 625 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF44P15621 663 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 MAOBP27338 520 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ALKBH1Q13686 389 aaKnown RBP12.92□□□□□ -0.34
VTI1B-204ENST00000554659 FAM111BQ6SJ93 734 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 SLC30A7Q8NEW0 376 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 VN1R3Q9BXE9 311 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 TMEM59Q9BXS4 323 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 UBQLN3Q9H347 655 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 PRSS16Q9NQE7 514 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
VTI1B-204ENST00000554659 OMGP23515 440 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 SFRP5Q5T4F7 317 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 STEAP1BQ6NZ63 245 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MISPQ8IVT2 679 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 CDCA4Q9BXL8 241 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.91□□□□□ -0.34
VTI1B-204ENST00000554659 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.91□□□□□ -0.34
VTI1B-204ENST00000554659 A6NCN8 305 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MSTNO14793 375 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 ZFAND5O76080 213 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 PDGFAP04085 211 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 NME2P22392 152 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 YPEL5P62699 121 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 DUSP6Q16828 381 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 AVPI1Q5T686 147 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MFSD12Q6NUT3 480 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 SSX9Q7RTT3 188 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 KCNG3Q8TAE7 436 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 TXNDC12O95881 172 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 TK1P04183 234 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MAKP20794 623 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 HABP2Q14520 560 aaPredicted RBP12.91□□□□□ -0.34
VTI1B-204ENST00000554659 HEPHL1Q6MZM0 1159 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 CMIPQ8IY22 773 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 NCDNQ9UBB6 729 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MCTS1Q9ULC4 181 aaKnown RBP12.91□□□□□ -0.34
VTI1B-204ENST00000554659 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 CNTRLQ7Z7A1 2325 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 KCNK2O95069 426 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 LALBAP00709 142 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 FOXB2Q5VYV0 432 aa12.91□□□□□ -0.34
VTI1B-204ENST00000554659 RDH10Q8IZV5 341 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms