RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 VTCN1Q7Z7D3 282 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 TMCO5AQ8N6Q1 288 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 OR5W2Q8NH69 310 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 FBXW5Q969U6 566 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF775Q96BV0 537 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-215ENST00000554656 TPD52L3Q96J77 140 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CIB1Q99828 191 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 HDHD5Q9BXW7 423 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 TRIM2Q9C040 744 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF350Q9GZX5 532 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 HOXD1Q9GZZ0 328 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CACYBPQ9HB71 228 aaKnown RBP9.34□□□□□ -0.91
SHMT2-215ENST00000554656 FANCFQ9NPI8 374 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 TIGARQ9NQ88 270 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 USE1Q9NZ43 259 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 NPAP1Q9NZP6 1156 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 OAZ3Q9UMX2 235 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 ENPP4Q9Y6X5 453 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CUBNO60494 3623 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 SERINC4A6NH21 518 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SAC3D1A6NKF1 404 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 GJE1A6NN92 205 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SHISA9B4DS77 424 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 H3BNH8 94 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF264O43296 627 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 DENRO43583 198 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 EIF4E2O60573 245 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 FCMRO60667 390 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 CYTIPO60759 359 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 CRLF1O75462 422 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 OPN1SWP03999 348 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF23P17027 643 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RHCEP18577 417 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 COX5AP20674 150 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RPS4Y1P22090 263 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 IGHV1-2P23083 117 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ALDH3A2P51648 485 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 CCR4P51679 360 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 FAPQ12884 760 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ITGADQ13349 1161 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 DAG1Q14118 895 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 P2RY6Q15077 328 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF141Q15928 474 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 MAPK14Q16539 360 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 LRRC36Q1X8D7 754 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RFX4Q33E94 735 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RPS26P11Q5JNZ5 115 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 C3orf33Q6P1S2 294 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SHQ1Q6PI26 577 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 FRRS1Q6ZNA5 592 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 CYP4Z1Q86W10 505 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 ZDHHC13Q8IUH4 622 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 PEX5LQ8IYB4 626 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SLC43A2Q8N370 569 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 FAM71CQ8NEG0 241 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 GPR32P1Q8NGA4 272 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SMAP2Q8WU79 429 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 HSD17B8Q92506 261 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 OR5B2Q96R09 309 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 EPYCQ99645 322 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RBM4BQ9BQ04 359 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 TRAF4Q9BUZ4 470 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 RBM4Q9BWF3 364 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SLCO5A1Q9H2Y9 848 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 REEP1Q9H902 201 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 NDUFAF4Q9P032 175 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 KLHL9Q9P2J3 617 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 GDF2Q9UK05 429 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 SLC9A8Q9Y2E8 581 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
SHMT2-215ENST00000554656 WDR45Q9Y484 360 aa9.33□□□□□ -0.92
SHMT2-215ENST00000554656 HEATR1Q9H583 2144 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 G3V2T6 193 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 KIAA0513O60268 411 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 ADAM11O75078 769 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 E2F6O75461 281 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 UGT2B17O75795 530 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 LGI1O95970 557 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 MT-ND1P03886 318 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 DBIP07108 87 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 UBTFL6P0CB48 400 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 PTNP21246 168 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 NTF4P34130 210 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 DIO1P49895 249 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 HMGA2P52926 109 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 SMIM11AP58511 58 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 CHRNEQ04844 493 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 RASGEF1BQ0VAM2 473 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 CBFBQ13951 182 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 LARS2Q15031 903 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 GPR68Q15743 365 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 STK11Q15831 433 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 NRF1Q16656 503 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 DUSP7Q16829 419 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 TYW3Q6IPR3 259 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms