RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 LGI1O95970 557 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 F12P00748 615 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 IFNA2P01563 188 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 IGKV3-15P01624 115 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CRYAAP02489 173 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 NUDT7P0C024 238 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 PNMTP11086 282 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF43P17038 809 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 GPX2P18283 190 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 PTNP21246 168 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 GTF2E2P29084 291 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SELENOPP49908 381 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MNAT1P51948 309 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SEC24CP53992 1094 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 UBE2NP61088 152 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MFSD13AQ14CX5 517 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 EFNB3Q15768 340 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM249Q2WGJ8 235 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 HIKESHIQ53FT3 197 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 C6orf52Q5T4I8 152 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 GCNT6Q5T4J0 391 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SWT1Q5T5J6 900 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 FAM69AQ5T7M9 428 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 C9orf135Q5VTT2 229 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 FAM91A1Q658Y4 838 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 HMBOX1Q6NT76 420 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 REEP3Q6NUK4 255 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 PODNL1Q6PEZ8 512 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 ULK3Q6PHR2 472 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SLC2A7Q6PXP3 512 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CXXC5Q7LFL8 322 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 KRT73Q86Y46 540 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 FUNDC1Q8IVP5 155 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MSRB3Q8IXL7 192 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CCDC36Q8IYA8 594 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 PCYOX1LQ8NBM8 494 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 NUP37Q8NFH4 326 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 OR4F15Q8NGB8 312 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 RP9Q8TA86 221 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 C10orf105Q8TEF2 133 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 FAM168AQ92567 244 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SLC38A4Q969I6 547 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MAL2Q969L2 176 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CMTM5Q96DZ9 223 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SLC41A3Q96GZ6 507 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 ALKBH3Q96Q83 286 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SLC38A2Q96QD8 506 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 LRRC37BQ96QE4 947 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MDFIQ99750 246 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SH3GL1Q99961 368 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 KCNS3Q9BQ31 491 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 C1QTNF6Q9BXI9 259 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 RSPO3Q9BXY4 272 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 MYLK2Q9H1R3 596 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM38AQ9H6F2 299 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 SLC52A3Q9NQ40 469 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 GID8Q9NWU2 228 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CCDC167Q9P0B6 97 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 B3GAT1Q9P2W7 334 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 RPS6KB2Q9UBS0 482 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 TESQ9UGI8 421 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 CORINQ9Y5Q5 1042 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 FKBP7Q9Y680 259 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 STAB1Q9NY15 2570 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 TRAV36DV7A0A075B6V5 113 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 A0A1B0GWA3 101 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 EVPLLA8MZ36 301 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 B9A039 149 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 TRAF3IP2O43734 574 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 GPRIN2O60269 458 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 FMO6PO60774 539 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SLC43A1O75387 559 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SERPINB7O75635 380 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CECR9P0C854 216 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CBR1P16152 277 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CDH2P19022 906 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 HTR2AP28223 471 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 THBS2P35442 1172 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SERPINF1P36955 418 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 RPS5P46782 204 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 PPOXP50336 477 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 PDLIM4P50479 330 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 GYS2P54840 703 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CLDN17P56750 224 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SNRPD2P62316 118 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CDK6Q00534 326 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ROR2Q01974 943 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 NAAAQ02083 359 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 KLF10Q13118 480 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CYLC2Q14093 348 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CHRFAM7AQ494W8 412 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ALG10BQ5I7T1 473 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 NIPAL3Q6P499 406 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 H1FNTQ75WM6 255 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF627Q7L945 461 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 LINGO2Q7L985 606 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ARPINQ7Z6K5 226 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF525Q8N782 197 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms