RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 JRKLQ9Y4A0 524 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 POLR3HQ9Y535 204 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ATRQ13535 2644 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 A0A087WV62 115 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 IGHV1-18A0A0C4DH31 117 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 OR5H1A6NKK0 313 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 AQP7P3A6NL99 342 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CLDN24A6NM45 220 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ATP6V1G2-DDX39BF2Z307 99 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 STX16-NPEPL1H3BU86 382 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 H7C417 338 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 M0R1B8 84 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NR5A2O00482 541 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 STX16O14662 325 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ACOT8O14734 319 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TNFRSF13BO14836 293 aaPredicted RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 KLF11O14901 512 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PCDH7O60245 1069 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF500O60304 480 aaPredicted RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CYTIPO60759 359 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CDH16O75309 829 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TUSC2O75896 110 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 RSL1D1O76021 490 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 YES1P07947 543 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TACSTD2P09758 323 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM225BP0DP42 221 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 GFAPP14136 432 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 SLC25A16P16260 332 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 COL8A2P25067 703 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TIA1P31483 386 aaKnown RBP eCLIP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 HPDP32754 393 aaPredicted RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 SPRP35270 261 aaPredicted RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 DEKP35659 375 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MAGEA4P43358 317 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FABP6P51161 128 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 P2RY4P51582 365 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NCBP2P52298 156 aaKnown RBP eCLIP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CTBP2P56545 445 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CARD18P57730 90 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 RPS3AP61247 264 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TRA2BP62995 288 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TUBA1BP68363 451 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 DEFA6Q01524 100 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 DR1Q01658 176 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 C17orf67Q0P5P2 114 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 C2orf80Q0P641 193 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FUT5Q11128 374 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PPA1Q15181 289 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MAPK14Q16539 360 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 GLE1Q53GS7 698 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 KLHL26Q53HC5 615 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 SLC25A53Q5H9E4 307 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TIMM23BQ5SRD1 257 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF678Q5SXM1 525 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TSPO2Q5TGU0 170 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 HIST2H2BDQ6DRA6 164 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ABLIM2Q6H8Q1 611 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FAM166AQ6J272 317 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 GSG1LQ6UXU4 331 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 Q6ZT83 130 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 RAPH1Q70E73 1250 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TUBA1AQ71U36 451 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FCRLAQ7L513 359 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CHMP1BQ7LBR1 199 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 OVCH2Q7RTZ1 564 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 TRABD2AQ86V40 505 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NR2C2APQ86WQ0 139 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CCDC25Q86WR0 208 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CTAGE3PQ8IX95 158 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FAM9CQ8IZT9 166 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ZIC4Q8N9L1 334 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 STEAP2Q8NFT2 490 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CLHC1Q8NHS4 586 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 GRK7Q8WTQ7 553 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PYROXD1Q8WU10 500 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 DCAKDQ8WVC6 231 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NUDCD2Q8WVJ2 157 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 OIT3Q8WWZ8 545 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 HSD17B8Q92506 261 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 YIPF5Q969M3 257 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FBXO17Q96EF6 278 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MED30Q96HR3 178 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 FCRL1Q96LA6 429 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF75AQ96N20 296 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MUS81Q96NY9 551 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PRRG4Q9BZD6 226 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 RBM38Q9H0Z9 239 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 STMN4Q9H169 189 aaPredicted RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 WDR41Q9HAD4 459 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 BRF2Q9HAW0 419 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NOX3Q9HBY0 568 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 EQTNQ9NQ60 294 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 SLC7A10Q9NS82 523 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ZDHHC18Q9NUE0 388 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 NINJ2Q9NZG7 142 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MYEF2Q9P2K5 600 aaKnown RBP2.7□□□□□ -1.98
SLIRP-202ENST00000553981 VPS29Q9UBQ0 182 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 DNAJB11Q9UBS4 358 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 BAIAP2L1Q9UHR4 511 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PYCARDQ9ULZ3 195 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms