RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 OAZ3Q9UMX2 235 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 SAC3D1A6NKF1 404 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 C11orf98E9PRG8 122 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 GPR171O14626 319 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 TNFSF13O75888 250 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 HLA-DOBP13765 273 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ANXA8P13928 327 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ANPEPP15144 967 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF26P17031 533 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF43P17038 809 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 GSTM3P21266 225 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 KIR2DL2P43627 348 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 SIRPAP78324 504 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 POU3F1Q03052 451 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 EEF1A1P5Q5VTE0 462 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 FAHD1Q6P587 224 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 GALNT5Q7Z7M9 940 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 STK32CQ86UX6 486 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 CCDC71Q8IV32 467 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 CNEP1R1Q8N9A8 125 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ZIC4Q8N9L1 334 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ATG16L2Q8NAA4 619 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 LRRC75AQ8NAA5 344 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 FANK1Q8TC84 345 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 SDCCAG3Q96C92 435 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF385AQ96PM9 386 aaKnown RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 NIPSNAP1Q9BPW8 284 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 SFXN3Q9BWM7 321 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 UCK2Q9BZX2 261 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-209ENST00000553949 RNF6Q9Y252 685 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 SIGLEC7Q9Y286 467 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 NOX1Q9Y5S8 564 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 FLVCR1Q9Y5Y0 555 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
SHMT2-209ENST00000553949 ESPL1Q14674 2120 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 PDLIM1O00151 329 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-209ENST00000553949 SERPINI2O75830 405 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 IL18BPO95998 194 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 F13BP05160 661 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 IFNGR1P15260 489 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 NTF4P34130 210 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 OPRM1P35372 400 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 SMSP52788 366 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 FXYD6P3P58550 94 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 PRPS1P60891 318 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 COX10Q12887 443 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 TAF11Q15544 211 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 ANKRD34AQ69YU3 496 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 VWA1Q6PCB0 445 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 CD300LDQ6UXZ3 194 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 NHLRC1Q6VVB1 395 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF620Q6ZNG0 422 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 RASSF6Q6ZTQ3 369 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 NUFIP2Q7Z417 695 aaKnown RBP10.87□□□□□ -0.67
SHMT2-209ENST00000553949 KIF18BQ86Y91 864 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 OR6K3Q8NGY3 331 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 TMEM45BQ96B21 275 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 STARD4Q96DR4 205 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 DCLRE1BQ9H816 532 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF556Q9HAH1 456 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 INIPQ9NRY2 104 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 COQ3Q9NZJ6 369 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 KIF17Q9P2E2 1029 aa10.87□□□□□ -0.67
SHMT2-209ENST00000553949 NOSIPQ9Y314 301 aaKnown RBP10.87□□□□□ -0.67
SHMT2-209ENST00000553949 A0A1W2PRG6 482 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 DVL2O14641 736 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 NDUFB2O95178 105 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 BMP5P22003 454 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 CHRNB4P30926 498 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 RPL4P36578 427 aaKnown RBP10.86□□□□□ -0.67
SHMT2-209ENST00000553949 DAPP51397 102 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 CLDN17P56750 224 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 RFX4Q33E94 735 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 RPL13AP3Q6NVV1 102 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 KLHL17Q6TDP4 642 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 SLC35D2Q76EJ3 337 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 AAED1Q7RTV5 226 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 BTLAQ7Z6A9 289 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 IGFN1Q86VF2 1251 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 LIX1LQ8IVB5 337 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 CLDN22Q8N7P3 220 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 DNAJC9Q8WXX5 260 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 TXNDC15Q96J42 360 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 GPX7Q96SL4 187 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-209ENST00000553949 CIB1Q99828 191 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 NDEL1Q9GZM8 345 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 ENKD1Q9H0I2 346 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 OR52D1Q9H346 318 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 EGLN3Q9H6Z9 239 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 SMURF2Q9HAU4 748 aa10.86□□□□□ -0.67
SHMT2-209ENST00000553949 PAPOLBQ9NRJ5 636 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms