RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CA1P00915 261 aaPredicted RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 ASGR1P07306 291 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 POLR2MP0CAP2 368 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 CALCBP10092 127 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ZNF3P17036 446 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 TBPP20226 339 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 MAPK3P27361 379 aaPredicted RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 HOXA6P31267 233 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 OTX2P32243 289 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 SHMT2P34897 504 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ACAA2P42765 397 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 HNMTP50135 292 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 CRISP3P54108 245 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ARPC4P59998 168 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ACTA1P68133 377 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 BASP1P80723 227 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 MADCAM1Q13477 382 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IDI1Q13907 227 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ATP6AP1Q15904 470 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IMMTQ16891 758 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 CCDC57Q2TAC2 916 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 TRIM16LQ309B1 348 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 FAM173BQ6P4H8 233 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 CLEC2AQ6UVW9 174 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IGFL1Q6UW32 110 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 RGS9BPQ6ZS82 235 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ZNF621Q6ZSS3 439 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 PCP2Q8IVA1 136 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 RNF10Q8N5U6 811 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 FADS6Q8N9I5 356 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 BBOF1Q8ND07 529 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 OR2L8Q8NGY9 312 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 RAPGEF5Q92565 580 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ARL5BQ96KC2 179 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 TCEANC2Q96MN5 208 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 TTC25Q96NG3 672 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 CATSPER2Q96P56 530 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 PSKH2Q96QS6 385 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 OMDQ99983 421 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ALG12Q9BV10 488 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 UPF3BQ9BZI7 483 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 KRT23Q9C075 422 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 NSRP1Q9H0G5 558 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 C8orf33Q9H7E9 229 aaPredicted RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 IL26Q9NPH9 171 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 FKBP14Q9NWM8 211 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ZNF226Q9NYT6 803 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 KIAA1257Q9ULG3 409 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 CLEC4AQ9UMR7 237 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 COPS3Q9UNS2 423 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 AK6Q9Y3D8 172 aaKnown RBP1.82□□□□□ -2.12
VRK1-202ENST00000553683 MFHAS1Q9Y4C4 1052 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 ASB3Q9Y575 518 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 MAP3K15Q6ZN16 1313 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 IQSEC2Q5JU85 1478 aa1.82□□□□□ -2.12
VRK1-202ENST00000553683 PIKFYVEQ9Y2I7 2098 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 NESP48681 1621 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 H0YIV9 168 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 MAGEB3O15480 346 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 POLR2DO15514 142 aaKnown RBP1.81□□□□□ -2.12
VRK1-202ENST00000553683 ZW10O43264 779 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ZSCAN12O43309 604 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 SS18L1O75177 396 aaPredicted RBP1.81□□□□□ -2.12
VRK1-202ENST00000553683 ZNF189O75820 626 aaPredicted RBP1.81□□□□□ -2.12
VRK1-202ENST00000553683 HEXBP07686 556 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 RETP07949 1114 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 GIPP09681 153 aaPredicted RBP1.81□□□□□ -2.12
VRK1-202ENST00000553683 EPB41P11171 864 aaKnown RBP1.81□□□□□ -2.12
VRK1-202ENST00000553683 HPGDP15428 266 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 CYP2F1P24903 491 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 CXCR2P25025 360 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 EVI2BP34910 448 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 HPCAL1P37235 193 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 EPS15P42566 896 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 OR1G1P47890 313 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 HTD2P86397 168 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 DR1Q01658 176 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 DEFB116Q30KQ4 102 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 BEND3Q5T5X7 828 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 C8orf74Q6P047 294 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ACOT1Q86TX2 421 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ERO1BQ86YB8 467 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 MFSD6LQ8IWD5 586 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 CD302Q8IX05 232 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 C12orf56Q8IXR9 622 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 FAM9CQ8IZT9 166 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 CLEC4FQ8N1N0 589 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ZNF565Q8N9K5 539 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 GMCL1P1Q8NEA9 526 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 OR5L2Q8NGL0 311 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 LILRB4Q8NHJ6 448 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 SLC22A8Q8TCC7 542 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 AGR3Q8TD06 166 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 FAM3CQ92520 227 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 TMIGD2Q96BF3 282 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 SGK3Q96BR1 496 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ASB9Q96DX5 294 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 CEP170P1Q96L14 293 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 ATP6V1G3Q96LB4 118 aa1.81□□□□□ -2.12
VRK1-202ENST00000553683 C16orf45Q96MC5 204 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms