RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 EGR3Q06889 387 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RASGEF1BQ0VAM2 473 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RUNX3Q13761 415 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 NFATC4Q14934 902 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 UBXN2BQ14CS0 331 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TCEA2Q15560 299 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ZNHIT3Q15649 155 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 DEFB115Q30KQ5 88 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 DEFB134Q4QY38 66 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TP53I3Q53FA7 332 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TRMT12Q53H54 448 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 C2orf27AQ580R0 203 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 LINC01590Q5TEZ4 76 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FCRL6Q6DN72 434 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RGS7BPQ6MZT1 257 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 LPCAT3Q6P1A2 487 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FBXO42Q6P3S6 717 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RPTNQ6XPR3 784 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HIST3H2AQ7L7L0 130 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SLC16A9Q7RTY1 509 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FAM220AQ7Z4H9 259 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 KRT77Q7Z794 578 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SDR16C5Q8N3Y7 309 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 EXD3Q8N9H8 876 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OR52E2Q8NGJ4 325 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OR51A7Q8NH64 312 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OR52I2Q8NH67 350 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MOSPD2Q8NHP6 518 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 BAHD1Q8TBE0 780 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ZNF296Q8WUU4 475 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 POF1BQ8WVV4 589 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RGP1Q92546 391 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HIST1H2ACQ93077 130 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RERGQ96A58 199 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OMA1Q96E52 524 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ELMOD3Q96FG2 381 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OR14A2Q96R54 314 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TNFRSF13CQ96RJ3 184 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PELOQ9BRX2 385 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 APOOQ9BUR5 198 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 DPCDQ9BVM2 203 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SLC17A9Q9BYT1 436 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 REG4Q9BYZ8 158 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SHARPINQ9H0F6 387 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 LMAN2LQ9H0V9 348 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RNF208Q9H0X6 261 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SLCO5A1Q9H2Y9 848 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SRMSQ9H3Y6 488 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ZNF576Q9H609 170 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 LDAHQ9H6V9 325 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SFXN1Q9H9B4 322 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FGF22Q9HCT0 170 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ADAP2Q9NPF8 381 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 NOX4Q9NPH5 578 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MED11Q9P086 117 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MTFP1Q9UDX5 166 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OR5V1Q9UGF6 321 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OPN4Q9UHM6 478 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 GNG8Q9UK08 70 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PLEKHA6Q9Y2H5 1048 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 YBX2Q9Y2T7 364 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TMEM14AQ9Y6G1 99 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 A0A0J9YY10 115 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 A0A1W2PQU0 124 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 LRRC72A6NJI9 287 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 ACOD1A6NK06 481 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 METTL12A8MUP2 240 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 C2orf74A8MZ97 194 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 C10orf142B7Z368 130 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 H3BUI4 141 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 TRIM77I1YAP6 450 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 ARPC1BO15143 372 aaKnown RBP4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 FOXS1O43638 330 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 SUSD5O60279 629 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 PRAMEF2O60811 474 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 CTSVO60911 334 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 UPK3AO75631 287 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 ZFPL1O95159 310 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 CFDP00746 253 aaPredicted RBP4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 APODP05090 189 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 CD14P08571 375 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 ADRB1P08588 477 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 CELA3AP09093 270 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 UBBP0CG47 229 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 UBCP0CG48 685 aaKnown RBP4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 GABRA1P14867 456 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 CXCL2P19875 107 aa4.79□□□□□ -1.64
TMEM55B-204ENST00000553602 FSTP19883 344 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms