RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 B3GLCTQ6Y288 498 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 DHDDSQ86SQ9 333 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 KRT73Q86Y46 540 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 PTOV1Q86YD1 416 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 SGMS2Q8NHU3 365 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 MUS81Q96NY9 551 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 CGREF1Q99674 301 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 PTDSS2Q9BVG9 487 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 SPATA5L1Q9BVQ7 753 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 C1QTNF6Q9BXI9 259 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 PARPBPQ9NWS1 579 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 ASB6Q9NWX5 421 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 TMEFF2Q9UIK5 374 aaPredicted RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 IGHV4-61A0A0C4DH41 118 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 A0A1W2PR80 420 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 BBIP1A8MTZ0 92 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 TPST2O60704 377 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 CCDC22O60826 627 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 MFN2O95140 757 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 VAMP5O95183 116 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 ITGA5P08648 1049 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 ZNF23P17027 643 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 ITGA2P17301 1181 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 SLC6A2P23975 617 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 HTR2AP28223 471 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 RBBP4Q09028 425 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 SELPLGQ14242 412 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 GABRA6Q16445 453 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 SWI5Q1ZZU3 235 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 COQ5Q5HYK3 327 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 CGB2Q6NT52 195 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 HIPK4Q8NE63 616 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 OR9K2Q8NGE7 335 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 OR52E4Q8NGH9 312 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 MFSD8Q8NHS3 518 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 BOD1Q96IK1 185 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 ZNF385AQ96PM9 386 aaKnown RBP10.3□□□□□ -0.76
SRP54-203ENST00000553544 WFDC6Q9BQY6 131 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 TAPBPLQ9BX59 468 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 MYOZ1Q9NP98 299 aaPredicted RBP10.3□□□□□ -0.76
SRP54-203ENST00000553544 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 TAS2R16Q9NYV7 291 aa10.3□□□□□ -0.76
SRP54-203ENST00000553544 IGKV1D-42A0A075B6H8 117 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 A0A0A6YYJ9 748 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 A0A1B0GWA3 101 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 PRORSD1PA6NEY8 169 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 FBP2O00757 339 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 SERPINB7O75635 380 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 GZMMP51124 257 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 MMEL1Q495T6 779 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 FAM91A1Q658Y4 838 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 TMEM225Q6GV28 225 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 CASP12Q6UXS9 341 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 CREB3L2Q70SY1 520 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 NET1Q7Z628 596 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 EPHX4Q8IUS5 362 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 C11orf65Q8NCR3 313 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 C1orf162Q8NEQ5 155 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 BHLHE22Q8NFJ8 381 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 ZFAND2BQ8WV99 257 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 DNAJA4Q8WW22 397 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 SLC38A4Q969I6 547 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 ZMYND19Q96E35 227 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 FBXO17Q96EF6 278 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 KTI12Q96EK9 354 aaPredicted RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 ZNF607Q96SK3 696 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 SH3GL1Q99961 368 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 KAT8Q9H7Z6 458 aaKnown RBP10.29□□□□□ -0.76
SRP54-203ENST00000553544 EVA1AQ9H8M9 152 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 ADPRHL2Q9NX46 363 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 CAPN7Q9Y6W3 813 aa10.29□□□□□ -0.76
SRP54-203ENST00000553544 AHSA1O95433 338 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 LGI1O95970 557 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 NPPAP01160 153 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 PNMTP11086 282 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 EGR1P18146 543 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 AQP1P29972 269 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 MTPNP58546 118 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 DUSP7Q16829 419 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 ALG10BQ5I7T1 473 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 C1QTNF12Q5T7M4 302 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 ULK3Q6PHR2 472 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 C5orf46Q6UWT4 87 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 AAED1Q7RTV5 226 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 CPLX4Q7Z7G2 160 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 GPAT4Q86UL3 456 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 ARMC8Q8IUR7 673 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 C3orf56Q8N813 242 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 WDR31Q8NA23 367 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 POMGNT2Q8NAT1 580 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 PCYOX1LQ8NBM8 494 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 HPS1Q92902 700 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 TAAR8Q969N4 342 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 ZNF317Q96PQ6 595 aaPredicted RBP10.28□□□□□ -0.76
SRP54-203ENST00000553544 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms