RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 ARMC8Q8IUR7 673 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 FUNDC1Q8IVP5 155 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 UEVLDQ8IX04 471 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF417Q8TAU3 575 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 C10orf105Q8TEF2 133 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 TAAR8Q969N4 342 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF587Q96SQ5 575 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-202ENST00000553426 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 VRK1Q99986 396 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-202ENST00000553426 EBF4Q9BQW3 602 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 PIMREGQ9BSJ6 248 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 EVA1AQ9H8M9 152 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 MYOZ1Q9NP98 299 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-202ENST00000553426 B3GAT2Q9NPZ5 323 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 VAPAQ9P0L0 249 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 SLAMF8Q9P0V8 285 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 TESQ9UGI8 421 aaKnown RBP11.11□□□□□ -0.63
LINC00643-202ENST00000553426 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 ANGPT4Q9Y264 503 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 CR1P17927 2039 aa11.11□□□□□ -0.63
LINC00643-202ENST00000553426 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF432O94892 652 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 VIMP08670 466 aaKnown RBP11.1□□□□□ -0.63
LINC00643-202ENST00000553426 OR4A8P0C604 315 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 HOXB9P17482 250 aaPredicted RBP11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ARR3P36575 388 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 TUBA1BP68363 451 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 TUBA4AP68366 448 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ARF1P84077 181 aaKnown RBP11.1□□□□□ -0.63
LINC00643-202ENST00000553426 SQLEQ14534 574 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 CARTPTQ16568 116 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 PAGE3Q5JUK9 113 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 TUBA1AQ71U36 451 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 SNX32Q86XE0 403 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF540Q8NDQ6 660 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ADPRHL1Q8NDY3 354 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 HIPK4Q8NE63 616 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 IL17RDQ8NFM7 739 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ASPNQ9BXN1 380 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 BEX2Q9BXY8 128 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 CRLF2Q9HC73 371 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 GPR35Q9HC97 309 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 CRNNQ9UBG3 495 aaPredicted RBP11.1□□□□□ -0.63
LINC00643-202ENST00000553426 USP22Q9UPT9 525 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 GMEB1Q9Y692 573 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 ANGPT2O15123 496 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 CECR9P0C854 216 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 CBR1P16152 277 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 GPX2P18283 190 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 HTR2AP28223 471 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 AQP1P29972 269 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 GZMKP49863 264 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 ATP4BP51164 291 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
LINC00643-202ENST00000553426 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00643-202ENST00000553426 PMS2P3Q13401 168 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 OR1Q1Q15612 314 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 NUP37Q8NFH4 326 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 ANKRD27Q96NW4 1050 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 TRIM33Q9UPN9 1127 aa11.09□□□□□ -0.63
LINC00643-202ENST00000553426 A0A087WUJ7 227 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 A0A096LNT2 108 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 A0A0B4J2E0 115 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 A0A1B0GX12 115 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 LOC390937A0A1W2PQ73 354 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 RNF212BA8MTL3 300 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF99A8MXY4 864 aaPredicted RBP11.08□□□□□ -0.64
LINC00643-202ENST00000553426 M0R3G1 203 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 TPST1O60507 370 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 FZD7O75084 574 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 LY6HO94772 140 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 OR6A2O95222 327 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 FAM157CP0CG43 387 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 NPR2P20594 1047 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 CBLP22681 906 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 AHCYP23526 432 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 PPOXP50336 477 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
LINC00643-202ENST00000553426 RBBP4Q09028 425 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 NPRL3Q12980 569 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms