RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 TTC33Q6PID6 262 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 XKRXQ6PP77 449 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 C16orf47Q6ZP98 133 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 Q6ZS92 163 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DCXRQ7Z4W1 244 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 LINC00523Q86TU6 105 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ZADH2Q8N4Q0 377 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 MARVELD2Q8N4S9 558 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 TRAM1L1Q8N609 369 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF557Q8N988 423 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 OR6Q1Q8NGQ2 317 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 OR2A12Q8NGT7 310 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 UBA3Q8TBC4 463 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FAM172AQ8WUF8 416 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ROBO4Q8WZ75 1007 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PROX1Q92786 737 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 MRPL48Q96GC5 212 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SERPINB11Q96P15 392 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 QKIQ96PU8 341 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DDOQ99489 341 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF559Q9BR84 538 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 WRAP53Q9BUR4 548 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF416Q9BWM5 594 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 TBC1D10AQ9BXI6 508 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ULBP1Q9BZM6 244 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 METTL9Q9H1A3 318 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 RIMS4Q9H426 269 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FGF22Q9HCT0 170 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 LHX9Q9NQ69 397 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GSN-AS1Q9NRJ2 163 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 OLAHQ9NV23 265 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DNAJC11Q9NVH1 559 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FAM120CQ9NX05 1096 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 IFNKQ9P0W0 207 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GAGE2DQ9UEU5 116 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FBXL17Q9UF56 701 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 BTNL2Q9UIR0 455 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 NENFQ9UMX5 172 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 COPS3Q9UNS2 423 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 RUVBL2Q9Y230 463 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PLLPQ9Y342 182 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 A0A0U1RQS6 177 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 A0A1B0GU03 582 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SERTM2A0A1B0GWG4 89 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 LINC00862A6NCI5 91 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 MAGEB17A8MXT2 336 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 A8MZ25 164 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 C21orf140B9A014 251 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 ITGB1BP1O14713 200 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SNAP91O60641 907 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SLCO2B1O94956 709 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 TNFAIP8O95379 198 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CTDNEP1O95476 244 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CSTAP01040 98 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 S100A8P05109 93 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PCCBP05166 539 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 FGF1P05230 155 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 HOXD4P09016 255 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF26P17031 533 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 AK4P27144 223 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CRABP1P29762 137 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CA7P43166 264 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SMSP52788 366 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 LRRC63Q05C16 580 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SLC3A1Q07837 685 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CDH17Q12864 832 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PRKAA1Q13131 559 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 CHIT1Q13231 466 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 MFAP5Q13361 173 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 APOFQ13790 326 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PDK3Q15120 406 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF699Q32M78 642 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 C2orf76Q3KRA6 126 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 UGT2A3Q6UWM9 527 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SH2D5Q6ZV89 423 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SYVN1Q86TM6 617 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 FAM131BQ86XD5 332 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PLD3Q8IV08 490 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 GPALPP1Q8IXQ4 340 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 GPD1LQ8N335 351 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SLC35F6Q8N357 371 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 KIF2BQ8N4N8 673 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 C4orf32Q8N8J7 132 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 BBS1Q8NFJ9 593 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 OR2T12Q8NG77 320 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 OR8J2Q8NGG1 315 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 OR6K2Q8NGY2 324 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 DTX3LQ8TDB6 740 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 STMN2Q93045 179 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 EXT2Q93063 718 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 SPACA9Q96E40 222 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PGAP3Q96FM1 320 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PGAM5Q96HS1 289 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 PPP1R16AQ96I34 528 aa4.25□□□□□ -1.73
ATXN3-218ENST00000553309 FOPNLQ96NB1 174 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms