RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 IL1RL1Q01638 556 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ROR2Q01974 943 aaKnown RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 SPOCK1Q08629 439 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 KLF10Q13118 480 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 VMACQ2NL98 169 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 HIKESHIQ53FT3 197 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 HSP90B2PQ58FF3 399 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF544Q6NX49 715 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ANKRD16Q6P6B7 361 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 LINC00114Q6XXX2 140 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 MUC15Q8N387 334 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 GPR137CQ8N3F9 429 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 PIK3C3Q8NEB9 887 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 LRRC58Q96CX6 371 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ECSITQ9BQ95 431 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 MOV10Q9HCE1 1003 aaKnown RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 CBLN4Q9NTU7 201 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF446Q9NWS9 450 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 ARPC4-TTLL3A0A0A6YYG9 625 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 MRASO14807 208 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 TRAF3IP2O43734 574 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 CHP2O43745 196 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 LY6G6DO95868 133 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 IGHV4-39P01824 125 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 CD247P20963 164 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 UBE2NP61088 152 aaKnown RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 PMS2P3Q13401 168 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 TNK1Q13470 666 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 VEZF1Q14119 521 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 C3orf36Q3SXR2 165 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 ENTPD8Q5MY95 495 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 CGB2Q6NT52 195 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 Q71RC1 249 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 OR6T1Q8NGN1 323 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 HS6ST2Q96MM7 605 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 SLC38A2Q96QD8 506 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 OR2M2Q96R28 347 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 KCNS3Q9BQ31 491 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 CCDC134Q9H6E4 229 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 MRPL39Q9NYK5 338 aaKnown RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 NOX1Q9Y5S8 564 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
ACTN1-207ENST00000553290 NSD1Q96L73 2696 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-207ENST00000553290 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 CPSF4LA6NMK7 179 aaKnown RBP11.31□□□□□ -0.6
ACTN1-207ENST00000553290 FXYD1O00168 92 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 BMP4P12644 408 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 APOBEC3AP31941 199 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-207ENST00000553290 GUCY1A3Q02108 690 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 PUDPQ08623 228 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 NPTX1Q15818 432 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 RABL3Q5HYI8 236 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 REP15Q6BDI9 236 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 C11orf71Q6IPW1 123 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-207ENST00000553290 B3GLCTQ6Y288 498 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 CALHM3Q86XJ0 350 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 TMEM123Q8N131 208 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 PCYOX1LQ8NBM8 494 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 VANGL1Q8TAA9 524 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-207ENST00000553290 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 PROX1Q92786 737 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 MPP4Q96JB8 637 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 LRR1Q96L50 414 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 MOGAT1Q96PD6 335 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 CACNG6Q9BXT2 260 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 MED4Q9NPJ6 270 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 GID8Q9NWU2 228 aa11.31□□□□□ -0.6
ACTN1-207ENST00000553290 CRNNQ9UBG3 495 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-207ENST00000553290 A0A096LPE4 126 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 LOC100653049A0A140TA62 436 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 A0A1W2PPZ6 126 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 PLPP3O14495 311 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 SLC22A2O15244 555 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 KRT34O76011 436 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 HPRP00739 348 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 IFNA14P01570 189 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CRYAAP02489 173 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms