RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SHC1P29353 583 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GABRA3P34903 492 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ARR3P36575 388 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CRYBB2P43320 205 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GATA4P43694 442 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ATP6V0D1P61421 351 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 HGFACQ04756 655 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF155Q12901 538 aaPredicted RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 SELENBP1Q13228 472 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 LARS2Q15031 903 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 VPS26BQ4G0F5 336 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GLIPR1L2Q4G1C9 344 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GAGE13Q4V321 117 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TECRLQ5HYJ1 363 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CASC10Q5T4H9 136 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 C9orf135Q5VTT2 229 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TMEM154Q6P9G4 183 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 DRICH1Q6PGQ1 229 aaPredicted RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 APOOLQ6UXV4 268 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 Q6YL49 198 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 MTERF4Q7Z6M4 381 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CNTN4Q8IWV2 1026 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CCDC36Q8IYA8 594 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CDK20Q8IZL9 346 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 NOA1Q8NC60 698 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 DEFB108BQ8NET1 73 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 OR7G2Q8NG99 324 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 OR52E4Q8NGH9 312 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 OR4C3Q8NH37 302 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 PIGXQ8TBF5 258 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 STAG3L4Q8TBR4 150 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 MAIP1Q8WWC4 291 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 YIPF5Q969M3 257 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TM4SF18Q96CE8 201 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 MS4A14Q96JA4 679 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF681Q96N22 645 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 OR5B2Q96R09 309 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GAL3ST1Q99999 423 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 B9D2Q9BPU9 175 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 RHOXF2Q9BQY4 288 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 SHCBP1LQ9BZQ2 653 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 DERL2Q9GZP9 239 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 HOXD1Q9GZZ0 328 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TNFRSF19Q9NS68 423 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 DECR2Q9NUI1 292 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CRNNQ9UBG3 495 aaPredicted RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 IL20RAQ9UHF4 553 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 PURGQ9UJV8 347 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ACOT9Q9Y305 439 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TCRBV7S3A2A0A539 114 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SLC22A23A1A5C7 686 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 FAM90A20PA6NIJ5 464 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CLDN25C9JDP6 229 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 E9PQ18 207 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 POC1B-GALNT4F8VUJ3 575 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RRP9O43818 475 aaKnown RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CDC14BO60729 498 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RP2O75695 350 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CLEC3BP05452 202 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CECR9P0C854 216 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 VSIG10L2P0DP72 767 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RAP2AP10114 183 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 H2AFXP16104 143 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 PGAM1P18669 254 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 EPORP19235 508 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CPT2P23786 658 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 TYK2P29597 1187 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 GLRXP35754 106 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 MAGEA6P43360 314 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 DIO1P49895 249 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RPS23P62266 143 aaKnown RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 DR1Q01658 176 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 PAX8Q06710 450 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 BST1Q10588 318 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 HERPUD1Q15011 391 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 LTB4RQ15722 352 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 GPR68Q15743 365 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 TBRG1Q3YBR2 411 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 HIKESHIQ53FT3 197 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 PLA1AQ53H76 456 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 KLF17Q5JT82 389 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SPANXN3Q5MJ09 141 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 AVPI1Q5T686 147 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 TEDDM1Q5T9Z0 273 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 TTC19Q6DKK2 380 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 WDR93Q6P2C0 686 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 BTNL3Q6UXE8 466 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 LRRN1Q6UXK5 716 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 FRRS1Q6ZNA5 592 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 GDPGP1Q6ZNW5 385 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 KLHL7Q8IXQ5 586 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 FAM9CQ8IZT9 166 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 METTL4Q8N3J2 472 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 GALNT4Q8N4A0 578 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RNF175Q8N4F7 328 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 ZSCAN4Q8NAM6 433 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SLC16A11Q8NCK7 471 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms