RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 COPZ1P61923 177 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 LSM11P83369 360 aaKnown RBP eCLIP10.36□□□□□ -0.75
CKAP4-202ENST00000552828 EPS8Q12929 822 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 SWI5Q1ZZU3 235 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 VMACQ2NL98 169 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 MST1LQ2TV78 715 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 DHRS4L2Q6PKH6 230 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 PATL1Q86TB9 770 aaKnown RBP10.36□□□□□ -0.75
CKAP4-202ENST00000552828 CALHM3Q86XJ0 350 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 ARMC8Q8IUR7 673 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 OR52E4Q8NGH9 312 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF583Q96ND8 569 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 OR11A1Q9GZK7 315 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 SHARPINQ9H0F6 387 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 SLC17A5Q9NRA2 495 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 TMEM181Q9P2C4 612 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 SLC13A4Q9UKG4 626 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 AMDHD2Q9Y303 409 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 CHST2Q9Y4C5 530 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 FLVCR1Q9Y5Y0 555 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 PMF1-BGLAPU3KQ54 211 aa10.36□□□□□ -0.75
CKAP4-202ENST00000552828 NDUFS8O00217 210 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 AP3D1O14617 1153 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF208O43345 1280 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 LMX1BO60663 402 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 MFN2O95140 757 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 ACAA2P42765 397 aaKnown RBP10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC1A3P43003 542 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 GZMKP49863 264 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC35A1P78382 337 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 TGFBR3Q03167 851 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC17A1Q14916 467 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 FAM91A1Q658Y4 838 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 WBP2NLQ6ICG8 309 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC15A3Q8IY34 581 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 OR2T12Q8NG77 320 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC26A7Q8TE54 656 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 TMEM45BQ96B21 275 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 C1QTNF6Q9BXI9 259 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC7A10Q9NS82 523 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 TAGLN3Q9UI15 199 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 SLC9A8Q9Y2E8 581 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 ATP23Q9Y6H3 246 aa10.35□□□□□ -0.75
CKAP4-202ENST00000552828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.75
CKAP4-202ENST00000552828 FAM220BPB1ANY3 271 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 TPST1O60507 370 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 IMPDH2P12268 514 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 PRG2P13727 222 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
CKAP4-202ENST00000552828 IGFBP5P24593 272 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 TACR3P29371 465 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 MPGP29372 298 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 MNAT1P51948 309 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 POLR2HP52434 150 aaKnown RBP10.34□□□□□ -0.75
CKAP4-202ENST00000552828 SLC7A2P52569 658 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 OR2B6P58173 313 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 PSME3P61289 254 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 LIPEQ05469 1076 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 KRT72Q14CN4 511 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 TSPO2Q5TGU0 170 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 C8orf82Q6P1X6 216 aaPredicted RBP10.34□□□□□ -0.75
CKAP4-202ENST00000552828 PAQR6Q6TCH4 344 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 CASP12Q6UXS9 341 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 CCDC80Q76M96 950 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 CADM2Q8N3J6 435 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 FITM2Q8N6M3 262 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 ARIH2OSQ8N7S6 290 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 ZIC4Q8N9L1 334 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 SMYD1Q8NB12 490 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 RASSF5Q8WWW0 418 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 NAA11Q9BSU3 229 aaPredicted RBP10.34□□□□□ -0.75
CKAP4-202ENST00000552828 ADAM19Q9H013 955 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 EVA1AQ9H8M9 152 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 ARL8BQ9NVJ2 186 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 UPB1Q9UBR1 384 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 OSGIN1Q9UJX0 560 aa10.34□□□□□ -0.75
CKAP4-202ENST00000552828 TMED7-TICAM2A0A0A6YYA0 188 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 ELOVL7A1L3X0 281 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 FRS3O43559 492 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 LY6HO94772 140 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 IFNA14P01570 189 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 OPN1SWP03999 348 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 C8BP07358 591 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 SRD5A1P18405 259 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 CCNA2P20248 432 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 CXCR1P25024 350 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 NR4A2P43354 598 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 PDLIM4P50479 330 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 RGS8P57771 180 aaPredicted RBP10.33□□□□□ -0.76
CKAP4-202ENST00000552828 PRPS1P60891 318 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 DUSP7Q16829 419 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 FAM120AOSQ5T036 256 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 FAM166AQ6J272 317 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 CCDC121Q6ZUS5 278 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 MICU2Q8IYU8 434 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 TAMM41Q96BW9 452 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms