RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 KDM8Q8N371 416 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF781Q8N8C0 355 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 PNPT1Q8TCS8 783 aaKnown RBP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 OXGR1Q96P68 337 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 LRRC37BQ96QE4 947 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF232Q9UNY5 417 aa12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF443Q9Y2A4 671 aaPredicted RBP12.22□□□□□ -0.45
CHMP1A-210ENST00000551981 DSPPQ9NZW4 1301 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 FTCDNL1E5RQL4 147 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 AIM2O14862 343 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 SERPINE1P05121 402 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 RPS5P46782 204 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 LIMS1P48059 325 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 CRISP3P54108 245 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM33P57088 247 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 GSG1Q2KHT4 349 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 TRMT5Q32P41 509 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 GKAP1Q5VSY0 366 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 FAHD2BQ6P2I3 314 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 PEG10Q86TG7 708 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 OR52E6Q96RD3 313 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF416Q9BWM5 594 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM247A6NEH6 219 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 PPIHO43447 177 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ITM2AO43736 263 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 OR2T1O43869 369 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 SEC14L2O76054 403 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 PNPP00491 289 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 HPXP02790 462 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 GSNP06396 782 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 GAAP10253 952 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 CD79AP11912 226 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 PRG2P13727 222 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ANPEPP15144 967 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 CREB1P16220 341 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 EPHA1P21709 976 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 GLRXP35754 106 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 CDKN2CP42773 168 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 RPL14P50914 215 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 NME5P56597 212 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 GALK2Q01415 458 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 MGARPQ8TDB4 240 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ZNF837Q96EG3 531 aaPredicted RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 OR2M2Q96R28 347 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ZBTB18Q99592 522 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 SYT3Q9BQG1 590 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 PTDSS2Q9BVG9 487 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 SPATA9Q9BWV2 254 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 TREM2Q9NZC2 230 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 B3GAT1Q9P2W7 334 aa12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 ZNF346Q9UL40 294 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-210ENST00000551981 M0R3G1 203 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 HLA-HP01893 362 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 BCHEP06276 602 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 TCN1P20061 433 aaPredicted RBP12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 COL8A2P25067 703 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 LSP1P33241 339 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 CRATP43155 626 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 ETV4P43268 484 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 UFM1P61960 85 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 MAPK11Q15759 364 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 CHI3L2Q15782 390 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 ZNF311Q5JNZ3 666 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 C5orf46Q6UWT4 87 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 SERPINA11Q86U17 422 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 CARM1Q86X55 608 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 SNX32Q86XE0 403 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 TMEM123Q8N131 208 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 SLC38A4Q969I6 547 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 KTI12Q96EK9 354 aaPredicted RBP12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 PKNOX2Q96KN3 472 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 TEX37Q96LM6 180 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 NUF2Q9BZD4 464 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 ZNF385DQ9H6B1 395 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 B3GAT2Q9NPZ5 323 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 ZNF275Q9NSD4 429 aaPredicted RBP12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 RPS6KB2Q9UBS0 482 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 FBXL3Q9UKT7 428 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 IFT52Q9Y366 437 aa12.19□□□□□ -0.46
CHMP1A-210ENST00000551981 TGP01266 2768 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms