RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 A0A096LNT2 108 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 IGHV1-18A0A0C4DH31 117 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 ATP6V1G2-DDX39BF2Z307 99 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 RPL36A-HNRNPH2H7BZ11 118 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 AIM2O14862 343 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 FMO6PO60774 539 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 TTKP33981 857 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 ROR2Q01974 943 aaKnown RBP11.36□□□□□ -0.59
NPAS3-209ENST00000551008 VMACQ2NL98 169 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 SLC22A25Q6T423 547 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 C5orf46Q6UWT4 87 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 MAPK1IP1LQ8NDC0 245 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 OR6S1Q8NH40 331 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 MCHR1Q99705 422 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 DHRS9Q9BPW9 319 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 PRSS27Q9BQR3 290 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 TMEM43Q9BTV4 400 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF426Q9BUY5 554 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 PCDHAC1Q9H158 963 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 CCDC134Q9H6E4 229 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
NPAS3-209ENST00000551008 CRNNQ9UBG3 495 aaPredicted RBP11.36□□□□□ -0.59
NPAS3-209ENST00000551008 MGAT4BQ9UQ53 548 aa11.36□□□□□ -0.59
NPAS3-209ENST00000551008 ARPC4-TTLL3A0A0A6YYG9 625 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 CPSF4LA6NMK7 179 aaKnown RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF587BE7ETH6 402 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 CHP2O43745 196 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 OR2T1O43869 369 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 SERPINB7O75635 380 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 C8BP07358 591 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF43P17038 809 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 TNFRSF1BP20333 461 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 PRPS1P60891 318 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 NCALDP61601 193 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 ARF1P84077 181 aaKnown RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 GUCY1A3Q02108 690 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 TGFBR3Q03167 851 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 CLEC12BQ2HXU8 276 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF613Q6PF04 617 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 KLHL17Q6TDP4 642 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 H1FNTQ75WM6 255 aaPredicted RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 SNX32Q86XE0 403 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 BHLHE22Q8NFJ8 381 aaPredicted RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 MAGEE2Q8TD90 523 aaPredicted RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 LRRC58Q96CX6 371 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 TXNDC15Q96J42 360 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 RADILQ96JH8 1075 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 EMC6Q9BV81 110 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 CACNG6Q9BXT2 260 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 TMEM27Q9HBJ8 222 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 NOX3Q9HBY0 568 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 GPR35Q9HC97 309 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 MED29Q9NX70 200 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 MRPL39Q9NYK5 338 aaKnown RBP11.35□□□□□ -0.59
NPAS3-209ENST00000551008 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
NPAS3-209ENST00000551008 A0A096LPE4 126 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 A0A1W2PPZ6 126 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 PLPP3O14495 311 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 SEC14L2O76054 403 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 CELA3BP08861 270 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 FUT4P22083 530 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 CALCRP30988 508 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 ARFIP2P53365 341 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 COQ5Q5HYK3 327 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 ANKRD16Q6P6B7 361 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 PATL1Q86TB9 770 aaKnown RBP11.34□□□□□ -0.59
NPAS3-209ENST00000551008 RANBP3LQ86VV4 465 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-209ENST00000551008 MUC15Q8N387 334 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 ADAMTS16Q8TE57 1224 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 HTRA1Q92743 480 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF583Q96ND8 569 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 ZNF317Q96PQ6 595 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-209ENST00000551008 EVA1AQ9H8M9 152 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 OBP2BQ9NPH6 170 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 MALRD1Q5VYJ5 2156 aa11.34□□□□□ -0.59
NPAS3-209ENST00000551008 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 MRASO14807 208 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 IGKV3-15P01624 115 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 CECR9P0C854 216 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 GTF2E2P29084 291 aaKnown RBP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 VEZF1Q14119 521 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF74Q16587 644 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 CEACAM16Q2WEN9 425 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 AGAP6Q5VW22 663 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF544Q6NX49 715 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms