RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 EPCAMP16422 314 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 CD53P19397 219 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PRKXP51817 358 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PPP2CBP62714 309 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ACTA2P62736 377 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ACTG2P63267 376 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PPP2CAP67775 309 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ASTLQ6HA08 431 aaPredicted RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 FAM109BQ6ICB4 259 aaPredicted RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 NUDT18Q6ZVK8 323 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 CD163Q86VB7 1156 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 OR1J4Q8NGS1 313 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 SETD7Q8WTS6 366 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 PPP1R1CQ8WVI7 109 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ARL11Q969Q4 196 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 HAVCR1Q96D42 359 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 DNAJA3Q96EY1 480 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PTCHD1Q96NR3 888 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 NMNAT3Q96T66 252 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ZDHHC5Q9C0B5 715 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PEX12O00623 359 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ICOSLGO75144 302 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZFPL1O95159 310 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PAPLNO95428 1278 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 LY86O95711 162 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 IFNA4P05014 189 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 HIST1H1CP16403 213 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 TYRP1P17643 537 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 RPS27P42677 84 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 METAP1P53582 386 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 TGIF1Q15583 401 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 MRPL2Q5T653 305 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 MOB3CQ70IA8 216 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 KLHDC8AQ8IYD2 350 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ACOT4Q8N9L9 421 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 CAMKVQ8NCB2 501 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZNF461Q8TAF7 563 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PLEKHA1Q9HB21 404 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 GHRLQ9UBU3 117 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 KCNK7Q9Y2U2 307 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 Q9Y3F1 56 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 RAB3DO95716 219 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ACTL6AO96019 429 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 RAB40ALP0C0E4 278 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 RPS11P62280 158 aaKnown RBP eCLIP11.11□□□□□ -0.63
VDR-208ENST00000550325 CSRP2Q16527 193 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 LCTLQ6UWM7 567 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ETV3LQ6ZN32 361 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 OR4E2Q8NGC2 313 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 LGR4Q9BXB1 951 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 GAREM1Q9H706 876 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PRSS3P35030 304 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 CENPAP49450 140 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 NR0B1P51843 470 aaKnown RBP11.11□□□□□ -0.63
VDR-208ENST00000550325 EFNB2P52799 333 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 TDGQ13569 410 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 STEAP1BQ6NZ63 245 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 FAM111BQ6SJ93 734 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 MTSS1LQ765P7 747 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 PFDN5Q99471 154 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZNF251Q9BRH9 671 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 ZNF281Q9Y2X9 895 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 SLC22A7Q9Y694 548 aa11.11□□□□□ -0.63
VDR-208ENST00000550325 BCL2L11O43521 198 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 CSF1P09603 554 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 ZNF28P17035 718 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 PTAFRP25105 342 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 JMJD6Q6NYC1 403 aaPredicted RBP11.1□□□□□ -0.63
VDR-208ENST00000550325 C5orf46Q6UWT4 87 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 ZNF227Q86WZ6 799 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 NUBPLQ8TB37 319 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 TSEN15Q8WW01 171 aaKnown RBP11.1□□□□□ -0.63
VDR-208ENST00000550325 NR4A3Q92570 626 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 ACTRT3Q9BYD9 372 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 CPEB1Q9BZB8 566 aaKnown RBP11.1□□□□□ -0.63
VDR-208ENST00000550325 ZNF350Q9GZX5 532 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 RPS10P5Q9NQ39 176 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
VDR-208ENST00000550325 ELOA3DA6NLF2 546 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms