RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KDM8Q8N371 416 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CLIP4Q8N3C7 705 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CADM2Q8N3J6 435 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 C3orf56Q8N813 242 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF781Q8N8C0 355 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CLDND2Q8NHS1 167 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF418Q8TF45 676 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 RDH5Q92781 318 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 MRPL24Q96A35 216 aaKnown RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF837Q96EG3 531 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 TEX37Q96LM6 180 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF75AQ96N20 296 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PANX1Q96RD7 426 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ROPN1BQ9BZX4 212 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ROPN1Q9HAT0 212 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 NOX3Q9HBY0 568 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CRLF2Q9HC73 371 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CALML5Q9NZT1 146 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 B3GAT1Q9P2W7 334 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 HAO1Q9UJM8 370 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 USP22Q9UPT9 525 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 RAP2CQ9Y3L5 183 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 GRIP1Q9Y3R0 1128 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF99A8MXY4 864 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 M0R233 179 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 OR2T1O43869 369 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 AHSA1O95433 338 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 TFP02787 698 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 GSNP06396 782 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PNMTP11086 282 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PRG2P13727 222 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 CREB1P16220 341 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 ACHEP22303 614 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 GPR6P46095 362 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 RPL14P50914 215 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 MVDP53602 400 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 ABCE1P61221 599 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 UFM1P61960 85 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 LMO4P61968 165 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 EGR4Q05215 589 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 SNTB2Q13425 540 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 CCNIQ14094 377 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 LARS2Q15031 903 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 CEACAM16Q2WEN9 425 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 LIN52Q52LA3 116 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF836Q6ZNA1 936 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 NET1Q7Z628 596 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PEG10Q86TG7 708 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 MDP1Q86V88 176 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 KIRREL3Q8IZU9 778 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 TMEM123Q8N131 208 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 GPR137CQ8N3F9 429 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PIK3C3Q8NEB9 887 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 SLC38A5Q8WUX1 472 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 GCDHQ92947 438 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 SLC35B4Q969S0 331 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 LRR1Q96L50 414 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PPP1R36Q96LQ0 422 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 OR52E6Q96RD3 313 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PTDSS2Q9BVG9 487 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 SPATA9Q9BWV2 254 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 MRPL37Q9BZE1 423 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 C20orf27Q9GZN8 174 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 DENND2DQ9H6A0 471 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 ARMC7Q9H6L4 198 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 PCDHB10Q9UN67 800 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 CHST2Q9Y4C5 530 aa8.47□□□□□ -1.05
TRAFD1-207ENST00000550051 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 A0A0G2JPF8 293 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HNRNPCL2B2RXH8 293 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HNRNPCL3B7ZW38 293 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 TRIM77I1YAP6 450 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 BIRC5O15392 142 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HNRNPCL1O60812 293 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HPXP02790 462 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 SERPINE1P05121 402 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 ZCCHC18P0CG32 403 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HNRNPCL4P0DMR1 293 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 GAAP10253 952 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 ANPEPP15144 967 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 ZNF14P17017 642 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 NCF2P19878 526 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 CDKN2CP42773 168 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 HILS1P60008 231 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 NPRL3Q12980 569 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 C1DQ13901 141 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 FXNQ16595 210 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 KRT80Q6KB66 452 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 C5orf46Q6UWT4 87 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 C6orf89Q6UWU4 347 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 NHLRC1Q6VVB1 395 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 C1orf229Q6ZS94 237 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 H1FNTQ75WM6 255 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 CARM1Q86X55 608 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 C20orf196Q8IYI0 205 aa8.46□□□□□ -1.06
TRAFD1-207ENST00000550051 OR51F2Q8NH61 342 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms