RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ZSWIM7Q19AV6 140 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 CEACAM16Q2WEN9 425 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 FAM69AQ5T7M9 428 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 ANKRD16Q6P6B7 361 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 HDXQ7Z353 690 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 ARMC8Q8IUR7 673 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 TMEM123Q8N131 208 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 HIPK4Q8NE63 616 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 OR6T1Q8NGN1 323 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 VANGL1Q8TAA9 524 aaPredicted RBP13.84□□□□□ -0.19
COX6A1-203ENST00000550009 TAMM41Q96BW9 452 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 SORCS2Q96PQ0 1159 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 SLC38A2Q96QD8 506 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 LINC00470Q9BZP3 86 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 FAIMQ9NVQ4 179 aa13.84□□□□□ -0.19
COX6A1-203ENST00000550009 LEF1Q9UJU2 399 aaPredicted RBP13.84□□□□□ -0.19
COX6A1-203ENST00000550009 EVPLLA8MZ36 301 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 M0R3G1 203 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 AIM2O14862 343 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 SERPINI2O75830 405 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 CD247P20963 164 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 PPIBP23284 216 aaKnown RBP13.83□□□□□ -0.2
COX6A1-203ENST00000550009 NAAAQ02083 359 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 HGFACQ04756 655 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 NRF1Q16656 503 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 MSMPQ1L6U9 139 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 SWI5Q1ZZU3 235 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 ULK3Q6PHR2 472 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 KLHL24Q6TFL4 600 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 H1FNTQ75WM6 255 aaPredicted RBP13.83□□□□□ -0.2
COX6A1-203ENST00000550009 KRT73Q86Y46 540 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 ZCCHC24Q8N2G6 241 aaKnown RBP13.83□□□□□ -0.2
COX6A1-203ENST00000550009 DPP10Q8N608 796 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 LRRC17Q8N6Y2 441 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 OR10A6Q8NH74 314 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 SLC35B4Q969S0 331 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 BOD1Q96IK1 185 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 MCHR1Q99705 422 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 CRLF2Q9HC73 371 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.2
COX6A1-203ENST00000550009 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
COX6A1-203ENST00000550009 NDUFAF1Q9Y375 327 aa13.83□□□□□ -0.2
COX6A1-203ENST00000550009 C11orf98E9PRG8 122 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 SHOX2O60902 331 aaPredicted RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 VAMP5O95183 116 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 WNT11O96014 354 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 IGLV1-44P01699 117 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 FUT4P22083 530 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 APOBEC3AP31941 199 aaPredicted RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 IDH3GP51553 393 aaPredicted RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 PPP2R2BQ00005 443 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 CAMK2DQ13557 499 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 C1DQ13901 141 aaKnown RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 NFYCQ13952 458 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 RAB35Q15286 201 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 ETFDHQ16134 617 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 CYP51A1Q16850 503 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 RABL3Q5HYI8 236 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 ENTPD8Q5MY95 495 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 LINC00114Q6XXX2 140 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 MDP1Q86V88 176 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 DNAJA4Q8WW22 397 aaPredicted RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 SLC41A3Q96GZ6 507 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 ADAD1Q96M93 576 aaKnown RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 ZNF607Q96SK3 696 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 TMEM120AQ9BXJ8 343 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 C12orf10Q9HB07 376 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 YAE1D1Q9NRH1 226 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 CRNNQ9UBG3 495 aaPredicted RBP13.82□□□□□ -0.2
COX6A1-203ENST00000550009 ANGPT4Q9Y264 503 aa13.82□□□□□ -0.2
COX6A1-203ENST00000550009 MXRA5Q9NR99 2828 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 ARPC4-TTLL3A0A0A6YYG9 625 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 SLC35F4A4IF30 521 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 RPL36A-HNRNPH2H7BZ11 118 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 FXYD1O00168 92 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 SLC43A1O75387 559 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 CRLF1O75462 422 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 IGFBP1P08833 259 aaPredicted RBP13.81□□□□□ -0.2
COX6A1-203ENST00000550009 NCALDP61601 193 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
COX6A1-203ENST00000550009 NPRL3Q12980 569 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 FAM91A1Q658Y4 838 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
COX6A1-203ENST00000550009 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 C10orf53Q8N6V4 93 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 C11orf65Q8NCR3 313 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 FGFBP3Q8TAT2 258 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 RHNO1Q9BSD3 238 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 SPATA5L1Q9BVQ7 753 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
COX6A1-203ENST00000550009 TMEM27Q9HBJ8 222 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms