RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SIGLEC7Q9Y286 467 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 FLVCR1Q9Y5Y0 555 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 INTS1Q8N201 2190 aaKnown RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 TNFSF13O75888 250 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 F13BP05160 661 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZNF26P17031 533 aaPredicted RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZNF43P17038 809 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 CTSSP25774 331 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 KIR2DL2P43627 348 aaPredicted RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 POU3F1Q03052 451 aaPredicted RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZP4Q12836 540 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 C1DQ13901 141 aaKnown RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 POU4F3Q15319 338 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 TMEM201Q5SNT2 666 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 EEF1A1P5Q5VTE0 462 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 MTFR2Q6P444 385 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 CREB3L2Q70SY1 520 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 FAM214BQ7L5A3 538 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 STK32CQ86UX6 486 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZDHHC13Q8IUH4 622 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 EPHX4Q8IUS5 362 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 UEVLDQ8IX04 471 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZNF385AQ96PM9 386 aaKnown RBP18.84■□□□□ 0.61
VPS29-206ENST00000549578 DGCR6LQ9BY27 220 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 GP6Q9HCN6 339 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 EMC3Q9P0I2 261 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 FLNCQ14315 2725 aa18.83■□□□□ 0.61
VPS29-206ENST00000549578 LOC102725191A0A1B0GVB3 256 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 ZNF724A8MTY0 619 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 PDLIM1O00151 329 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 TRAF3IP2O43734 574 aaPredicted RBP18.83■□□□□ 0.6
VPS29-206ENST00000549578 PTP4A3O75365 173 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 ADAP00813 363 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 ANPEPP15144 967 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 NTF4P34130 210 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 FXYD6P3P58550 94 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 VWA1Q6PCB0 445 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 NUFIP2Q7Z417 695 aaKnown RBP18.83■□□□□ 0.6
VPS29-206ENST00000549578 PXKQ7Z7A4 578 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 IGFN1Q86VF2 1251 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 SVOPLQ8N434 492 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 ZIC4Q8N9L1 334 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 ATG16L2Q8NAA4 619 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 FANK1Q8TC84 345 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 FANCFQ9NPI8 374 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 IL20RAQ9UHF4 553 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 EMC9Q9Y3B6 208 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 NOX1Q9Y5S8 564 aa18.83■□□□□ 0.6
VPS29-206ENST00000549578 NCOA6Q14686 2063 aaPredicted RBP18.82■□□□□ 0.6
VPS29-206ENST00000549578 GPR171O14626 319 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ZG16O60844 167 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 CRHP06850 196 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 BMP5P22003 454 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ANKDD1AQ495B1 522 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ALG10Q5BKT4 473 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.82■□□□□ 0.6
VPS29-206ENST00000549578 LIX1LQ8IVB5 337 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ANKK1Q8NFD2 765 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 SDCCAG3Q96C92 435 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 SFXN3Q9BWM7 321 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 ENKD1Q9H0I2 346 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 C12orf49Q9H741 205 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 MED29Q9NX70 200 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 KIF17Q9P2E2 1029 aa18.82■□□□□ 0.6
VPS29-206ENST00000549578 NOSIPQ9Y314 301 aaKnown RBP18.82■□□□□ 0.6
VPS29-206ENST00000549578 ANXA8P13928 327 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 CLDN17P56750 224 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 FAHD1Q6P587 224 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 NHLRC1Q6VVB1 395 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 THSD4Q6ZMP0 1018 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 ZNF620Q6ZNG0 422 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 BTLAQ7Z6A9 289 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 GALNT5Q7Z7M9 940 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 KIF18BQ86Y91 864 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 LRRC75AQ8NAA5 344 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 STARD4Q96DR4 205 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 TXNDC15Q96J42 360 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 CIB1Q99828 191 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 TACO1Q9BSH4 297 aaKnown RBP18.81■□□□□ 0.6
VPS29-206ENST00000549578 UCK2Q9BZX2 261 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 EGLN3Q9H6Z9 239 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 SMURF2Q9HAU4 748 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 INIPQ9NRY2 104 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 COQ3Q9NZJ6 369 aa18.81■□□□□ 0.6
VPS29-206ENST00000549578 MCIDASD6RGH6 385 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 NDUFB2O95178 105 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 SOX14O95416 240 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 IFNGR1P15260 489 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 EDNRAP25101 427 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 OPRM1P35372 400 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 DAPP51397 102 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 PRPS1P60891 318 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 SMARCD3Q6STE5 483 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 KLHL17Q6TDP4 642 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 RASSF6Q6ZTQ3 369 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 OR6K3Q8NGY3 331 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 GABARAPL1Q9H0R8 117 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 OR52D1Q9H346 318 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 DCLRE1BQ9H816 532 aa18.8■□□□□ 0.6
VPS29-206ENST00000549578 ZNF556Q9HAH1 456 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms