RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SLC25A15Q9Y619 301 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 A0A096LPE4 126 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 A0A1W2PPZ6 126 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 PLPP3O14495 311 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SMPD2O60906 423 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 FZD7O75084 574 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SLC43A1O75387 559 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SEC14L2O76054 403 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SERPINA1P01009 418 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ADORA3P0DMS8 318 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 UGT2B15P54855 530 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 TUBA1BP68363 451 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 TUBA4AP68366 448 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ROR2Q01974 943 aaKnown RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 TGFBR3Q03167 851 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 PUDPQ08623 228 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 MFSD13AQ14CX5 517 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ZNF74Q16587 644 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 HMBOX1Q6NT76 420 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 HACD2Q6Y1H2 254 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 TUBA1AQ71U36 451 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ABHD12BQ7Z5M8 362 aaPredicted RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 P2RY8Q86VZ1 359 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 GPR137CQ8N3F9 429 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SCAIQ8N9R8 606 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 WDR31Q8NA23 367 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 RBM15BQ8NDT2 890 aaKnown RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 ADPRHL1Q8NDY3 354 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 LILRB1Q8NHL6 650 aaPredicted RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 FAM162AQ96A26 154 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 PERPQ96FX8 193 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 TXNDC15Q96J42 360 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 MUS81Q96NY9 551 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 OR2M2Q96R28 347 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 PRSS27Q9BQR3 290 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SLC17A5Q9NRA2 495 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ARL8BQ9NVJ2 186 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 MRPL39Q9NYK5 338 aaKnown RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 EGFL7Q9UHF1 273 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 RIMS3Q9UJD0 308 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 AP3M1Q9Y2T2 418 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 ARL2BPQ9Y2Y0 163 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 VPS13CQ709C8 3753 aa13.84□□□□□ -0.19
DDX54-205ENST00000548786 RAI1Q7Z5J4 1906 aaPredicted RBP13.84□□□□□ -0.19
DDX54-205ENST00000548786 M0R3G1 203 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 PIP5K1CO60331 668 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 OR6A2O95222 327 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 MT-ATP6P00846 226 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 TCN1P20061 433 aaPredicted RBP13.83□□□□□ -0.2
DDX54-205ENST00000548786 FUT4P22083 530 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 PRDX6P30041 224 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 SELENOWP63302 87 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 PHYHD1Q5SRE7 291 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 KLHL24Q6TFL4 600 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 C20orf204Q6ZNR8 217 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 FAM156AQ8NDB6 213 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 OR5J2Q8NH18 312 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 OR6S1Q8NH40 331 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 LZICQ8WZA0 190 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 MPP4Q96JB8 637 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 HSH2DQ96JZ2 352 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 SPAG4Q9NPE6 437 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 MEPEQ9NQ76 525 aaPredicted RBP13.83□□□□□ -0.2
DDX54-205ENST00000548786 NANSQ9NR45 359 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 BEX4Q9NWD9 120 aaPredicted RBP13.83□□□□□ -0.2
DDX54-205ENST00000548786 RCE1Q9Y256 329 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 CADP27708 2225 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 DSCAMO60469 2012 aa13.83□□□□□ -0.2
DDX54-205ENST00000548786 FLNAP21333 2647 aaKnown RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 SLC35F4A4IF30 521 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 J3KTA2 159 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 RNF13O43567 381 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ZNF432O94892 652 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 OR5F1O95221 314 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 HIST1H2ABP04908 130 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 CDH11P55287 796 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ARF1P84077 181 aaKnown RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 CAMK2DQ13557 499 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 TBRG1Q3YBR2 411 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ZNF672Q499Z4 452 aaPredicted RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 TMEM108Q6UXF1 575 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 FKBP9P1Q75LS8 142 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 HIST3H2AQ7L7L0 130 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 NANOGNBQ7Z5D8 188 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 MEX3DQ86XN8 651 aaKnown RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 TMEM123Q8N131 208 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 C1orf162Q8NEQ5 155 aaPredicted RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 HIST1H2ACQ93077 130 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 PIGTQ969N2 578 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 FBXW5Q969U6 566 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ZNF837Q96EG3 531 aaPredicted RBP13.82□□□□□ -0.2
DDX54-205ENST00000548786 LRRC37BQ96QE4 947 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ZNF426Q9BUY5 554 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms