RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PM20D2Q8IYS1 436 aa21.15■□□□□ 0.98
NPAS3-206ENST00000548645 NMNAT3Q96T66 252 aa21.15■□□□□ 0.98
NPAS3-206ENST00000548645 HDAC8Q9BY41 377 aa21.15■□□□□ 0.98
NPAS3-206ENST00000548645 TRIM2Q9C040 744 aa21.15■□□□□ 0.98
NPAS3-206ENST00000548645 ADAM18Q9Y3Q7 739 aa21.15■□□□□ 0.98
NPAS3-206ENST00000548645 BRINP1O60477 761 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 MST1P26927 711 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 APMAPQ9HDC9 416 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 PURGQ9UJV8 347 aaKnown RBP21.14■□□□□ 0.97
NPAS3-206ENST00000548645 TMEM272A0A1B0GTI8 110 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 SIGLEC6O43699 453 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 TACSTD2P09758 323 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 AKAIN1P0CW23 69 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 AGTR1P30556 359 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 SCAND1P57086 179 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 ZNF614Q8N883 585 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 NPEPL1Q8NDH3 523 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 FKRPQ9H9S5 495 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 ATPIF1Q9UII2 106 aa21.14■□□□□ 0.97
NPAS3-206ENST00000548645 A0A0D9SG52 128 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ADH1CP00326 375 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ANXA2P07355 339 aaKnown RBP21.13■□□□□ 0.97
NPAS3-206ENST00000548645 FGL1Q08830 312 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ZCCHC12Q6PEW1 402 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.13■□□□□ 0.97
NPAS3-206ENST00000548645 OR51S1Q8NGJ8 323 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 TIMM29Q9BSF4 260 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 PBX4Q9BYU1 374 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 SLC6A17Q9H1V8 727 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 STARP49675 285 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 RPS15AP62244 130 aaKnown RBP21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ID2Q02363 134 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ZNF546Q86UE3 836 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 ZNF227Q86WZ6 799 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 OR4D10Q8NGI6 311 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 OR5AK2Q8NH90 309 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 PXYLP1Q8TE99 480 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 SERINC2Q96SA4 455 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 EXO5Q9H790 373 aa21.13■□□□□ 0.97
NPAS3-206ENST00000548645 GTF2F2P13984 249 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 EPCAMP16422 314 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 GRPRP30550 384 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 GABRA3P34903 492 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 SOX2P48431 317 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 B2MP61769 119 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 DEFB103AP81534 67 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 EIF2B5Q13144 721 aaKnown RBP21.12■□□□□ 0.97
NPAS3-206ENST00000548645 IRF4Q15306 451 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 MAMSTRQ6ZN01 415 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 DPY19L2P2Q6ZN68 376 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 FAM220AQ7Z4H9 259 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 LRRTM1Q86UE6 522 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 MBNL1Q9NR56 388 aaKnown RBP21.12■□□□□ 0.97
NPAS3-206ENST00000548645 CYB5R1Q9UHQ9 305 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 A0A087WV62 115 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 A0A1B0GVT2 93 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 RPP14O95059 124 aaKnown RBP21.12■□□□□ 0.97
NPAS3-206ENST00000548645 SLC35G6P0C7Q6 338 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 ZNF234Q14588 700 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 ZNF684Q5T5D7 378 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 BPIFCQ8NFQ6 507 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 POLE3Q9NRF9 147 aa21.12■□□□□ 0.97
NPAS3-206ENST00000548645 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 OR6C68A6NDL8 312 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 LRRC72A6NJI9 287 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 SIGLEC5O15389 551 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 SIGLEC14Q08ET2 396 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 DEFB134Q4QY38 66 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 MOB3CQ70IA8 216 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 RNF166Q96A37 237 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 NMNAT2Q9BZQ4 307 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 ALX4Q9H161 411 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 MKKSQ9NPJ1 570 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 CREBZFQ9NS37 354 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 GMEB2Q9UKD1 530 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 DAPP1Q9UN19 280 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 GGT3PA6NGU5 568 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 B3GALT2O43825 422 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 GLCEO94923 617 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 RUNX2Q13950 521 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 CCDC36Q8IYA8 594 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 CAMKVQ8NCB2 501 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 ZCCHC10Q8TBK6 192 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 NT5CQ8TCD5 201 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 CCDC107Q8WV48 283 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 SLC7A5P2Q9GIP4 190 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 BARX1Q9HBU1 254 aaPredicted RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 RXFP3Q9NSD7 469 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 ABHD14A-ACY1A0A1B0GW23 586 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 H7C2Y5 167 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 EIF4E2O60573 245 aaKnown RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 FNTBP49356 437 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 SNRPNP63162 240 aaKnown RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 ALKBH1Q13686 389 aaKnown RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 ELP2Q6IA86 826 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 STEAP1Q9UHE8 339 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 CDV3Q9UKY7 258 aaKnown RBP21.11■□□□□ 0.97
NPAS3-206ENST00000548645 KCNK7Q9Y2U2 307 aa21.11■□□□□ 0.97
NPAS3-206ENST00000548645 PLEKHM1Q9Y4G2 1056 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms