RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MKL2Q9ULH7 1088 aa16.84■□□□□ 0.29
PRPF40B-208ENST00000548436 CLEC4AQ9UMR7 237 aa16.84■□□□□ 0.29
PRPF40B-208ENST00000548436 KLHDC2Q9Y2U9 406 aa16.84■□□□□ 0.29
PRPF40B-208ENST00000548436 AK6Q9Y3D8 172 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-208ENST00000548436 A0A087WV48 116 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 KHNYNO15037 678 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 HLA-DMAP28067 261 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 SLC6A8P48029 635 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 ZFP69Q49AA0 526 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 C1QL3Q5VWW1 255 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 LANCL3Q6ZV70 420 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 ASB18Q6ZVZ8 466 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 NANOGNBQ7Z5D8 188 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 OR1N1Q8NGS0 311 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 RFT1Q96AA3 541 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 ZNF501Q96CX3 271 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 MRPL48Q96GC5 212 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 FYTTD1Q96QD9 318 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 MARVELD1Q9BSK0 173 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 GRHPRQ9UBQ7 328 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 ALG5Q9Y673 324 aa16.83■□□□□ 0.28
PRPF40B-208ENST00000548436 A0A1B0GX78 115 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 TMEM72A0PK05 275 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 TO15178 435 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 PIN1P1O15428 100 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 NDUFB5O43674 189 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 ITPKBP27987 946 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 RCVRNP35243 200 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 MAGEB1P43366 347 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 GPLD1P80108 840 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 PLCXD2Q0VAA5 305 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 GPR176Q14439 515 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 SLC16A9Q7RTY1 509 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 OMA1Q96E52 524 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 NUDT22Q9BRQ3 303 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 BEX2Q9BXY8 128 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 NOX4Q9NPH5 578 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 FGF21Q9NSA1 209 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 CTSFQ9UBX1 484 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 MOKQ9UQ07 419 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 ALG1L2C9J202 215 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 EEF1E1O43324 174 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 GPRIN2O60269 458 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 ABCD3P28288 659 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 LCN1P31025 176 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 HSD17B12Q53GQ0 312 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 SHISA6Q6ZSJ9 500 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 OVCH1Q7RTY7 1134 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 NUP54Q7Z3B4 507 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 TIGD4Q8IY51 512 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 HSD17B8Q92506 261 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 RGP1Q92546 391 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 MFRPQ9BY79 579 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 OR2B2Q9GZK3 357 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 FKRPQ9H9S5 495 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 BRD7Q9NPI1 651 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 ABRACLQ9P1F3 81 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 WNT16Q9UBV4 365 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 COPS7AQ9UBW8 275 aa16.82■□□□□ 0.28
PRPF40B-208ENST00000548436 A0A1W2PQD3 144 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ZFPL1O95159 310 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 BGLAPP02818 100 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 OR8G3PP0DMU2 310 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 AHCYP23526 432 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 CXCR1P25024 350 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 PYHIN1Q6K0P9 492 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 SLC29A4Q7RTT9 530 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 OR6V1Q8N148 313 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 GFI1Q99684 422 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 TBL1XR1Q9BZK7 514 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ZNF281Q9Y2X9 895 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 TVP23AA6NH52 213 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ACOD1A6NK06 481 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 NUDT14O95848 222 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 HIST1H2ABP04908 130 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 GSTT2P0CG29 244 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 GSTT2BP0CG30 244 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 SRMP19623 302 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 CD83Q01151 205 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 DMWDQ09019 674 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 BCL2A1Q16548 175 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 EMC4Q5J8M3 183 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 HIST3H2AQ7L7L0 130 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ZNF441Q8N8Z8 693 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 HIST1H2ACQ93077 130 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 SHDQ96IW2 340 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ADAD1Q96M93 576 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 SNX18Q96RF0 628 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 ANKRD10Q9NXR5 420 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 TAS2R5Q9NYW4 299 aa16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 MRM2Q9UI43 246 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-208ENST00000548436 CENPXA8MT69 81 aa16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 ZNF879B4DU55 563 aa16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 EIF4E2O60573 245 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 UPK3AO75631 287 aa16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 RPP14O95059 124 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 SLC6A1P30531 599 aa16.8■□□□□ 0.28
PRPF40B-208ENST00000548436 SRP9P49458 86 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms