RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 TNFRSF1BP20333 461 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 PTNP21246 168 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 PAX7P23759 505 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 OR1E2P47887 323 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 FOXG1P55316 489 aaPredicted RBP13.35□□□□□ -0.27
RNF41-205ENST00000548225 MS4A18Q3C1V0 323 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 CBLL1Q75N03 491 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 OR52N5Q8NH56 324 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 GEMIN6Q8WXD5 167 aaKnown RBP13.35□□□□□ -0.27
RNF41-205ENST00000548225 RADILQ96JH8 1075 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 PRRC1Q96M27 445 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 ALKBH3Q96Q83 286 aaPredicted RBP13.35□□□□□ -0.27
RNF41-205ENST00000548225 PRSS27Q9BQR3 290 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 NANSQ9NR45 359 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 SLC17A5Q9NRA2 495 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 TAGLN3Q9UI15 199 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 RIMS3Q9UJD0 308 aa13.35□□□□□ -0.27
RNF41-205ENST00000548225 HTR3EA5X5Y0 456 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 LRRN3E7EW58 273 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 RPL36A-HNRNPH2H7BZ11 118 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 OR6A2O95222 327 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 CH25HO95992 272 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 MT-ND1P03886 318 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 IFNW1P05000 195 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 PTAFRP25105 342 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 POU3F1Q03052 451 aaPredicted RBP13.34□□□□□ -0.27
RNF41-205ENST00000548225 BSPH1Q075Z2 132 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 ST3GAL3Q11203 375 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 PIN1Q13526 163 aaPredicted RBP13.34□□□□□ -0.27
RNF41-205ENST00000548225 C9orf135Q5VTT2 229 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 HMBOX1Q6NT76 420 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 TMEM108Q6UXF1 575 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 OR2M2Q96R28 347 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 CCL19Q99731 98 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 MOV10Q9HCE1 1003 aaKnown RBP13.34□□□□□ -0.27
RNF41-205ENST00000548225 NDE1Q9NXR1 346 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 NPAP1Q9NZP6 1156 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 GMPR2Q9P2T1 348 aaKnown RBP13.34□□□□□ -0.27
RNF41-205ENST00000548225 RPS6KA6Q9UK32 745 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 MGAT4BQ9UQ53 548 aa13.34□□□□□ -0.27
RNF41-205ENST00000548225 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 KPNA4O00629 521 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 CLOCKO15516 846 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 SHOX2O60902 331 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 GMNNO75496 209 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 UPK3AO75631 287 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 ZNF682O95780 498 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 FAM107AO95990 144 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 WNT11O96014 354 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 HPRP00739 348 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 PLAUP00749 431 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 SERPINA1P01009 418 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 HIST1H2ABP04908 130 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 ADORA3P0DMS8 318 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 AHCYP23526 432 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 PRPS1P60891 318 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 ROR2Q01974 943 aaKnown RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 ZP4Q12836 540 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 HIST3H2AQ7L7L0 130 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 LRRC75A-AS1Q8N1F1 130 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 GPR137CQ8N3F9 429 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 OR1K1Q8NGR3 316 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 TMEM239Q8WW34 195 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF41-205ENST00000548225 HIST1H2ACQ93077 130 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 FAM162AQ96A26 154 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 LRR1Q96L50 414 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 CCT8L2Q96SF2 557 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 MEPEQ9NQ76 525 aaPredicted RBP13.33□□□□□ -0.28
RNF41-205ENST00000548225 ADA2Q9NZK5 511 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 A4GNTQ9UNA3 340 aa13.33□□□□□ -0.28
RNF41-205ENST00000548225 HLA-DOBP13765 273 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 MNAT1P51948 309 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 LGALS3BPQ08380 585 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 KRT72Q14CN4 511 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
RNF41-205ENST00000548225 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 NHLRC1Q6VVB1 395 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 FKBP9P1Q75LS8 142 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 SLC46A3Q7Z3Q1 461 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 NANOGNBQ7Z5D8 188 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 VTCN1Q7Z7D3 282 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 NKAIN4Q8IVV8 208 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 TMEM255BQ8WV15 326 aa13.32□□□□□ -0.28
RNF41-205ENST00000548225 LIPHQ8WWY8 451 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms