RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NANSQ9NR45 359 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 DCAF13Q9NV06 445 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 RPS6KA6Q9UK32 745 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 RCE1Q9Y256 329 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 OR6C65A6NJZ3 312 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 OR5H1A6NKK0 313 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ENO4A6NNW6 628 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 FFAR1O14842 300 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 UPK3AO75631 287 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 KRT33AO76009 404 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 FUT4P22083 530 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 AHCYP23526 432 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 MPGP29372 298 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 IFNA8P32881 189 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 MSX2P35548 267 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 PPA1Q15181 289 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 GABRA6Q16445 453 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 SEZ6L2Q6UXD5 910 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 NHLRC1Q6VVB1 395 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 SLC46A3Q7Z3Q1 461 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 BCAS4Q8TDM0 211 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 MUCL1Q96DR8 90 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 HS6ST2Q96MM7 605 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 GORASP2Q9H8Y8 452 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 C20orf141Q9NUB4 165 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ST6GALNAC2Q9UJ37 374 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ZNF229Q9UJW7 825 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ITGB1BP2Q9UKP3 347 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 NOX1Q9Y5S8 564 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ALPK2Q86TB3 2170 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 MYO9AB2RTY4 2548 aa16.47■□□□□ 0.23
PRPF40B-206ENST00000547764 ASAH2BP0C7U1 165 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 ADORA3P0DMS8 318 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 T-ENOLP0DO92 83 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 UMPSP11172 480 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 NR1H2P55055 460 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 POU3F1Q03052 451 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 TGFBR3Q03167 851 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 LINGO2Q7L985 606 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 ABHD12BQ7Z5M8 362 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 TSEN54Q7Z6J9 526 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 PXKQ7Z7A4 578 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 OFCC1Q8IZS5 231 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 TXNDC15Q96J42 360 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 ALKBH3Q96Q83 286 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 OR2M2Q96R28 347 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 FNDC11Q9BVV2 318 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 LINC00470Q9BZP3 86 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 NGBQ9NPG2 151 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 MAN2C1Q9NTJ4 1040 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 MED29Q9NX70 200 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 TAS2R5Q9NYW4 299 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 MAGEL2Q9UJ55 1249 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 PLEKHA6Q9Y2H5 1048 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 MED31Q9Y3C7 131 aa16.46■□□□□ 0.23
PRPF40B-206ENST00000547764 A0A1W2PR80 420 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF587BE7ETH6 402 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 C11orf98E9PRG8 122 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 AKAP8O43823 692 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SLC43A1O75387 559 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SERPINI2O75830 405 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 OR6A2O95222 327 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 IGF2P01344 180 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 HIST1H2ABP04908 130 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 CDH2P19022 906 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 CALB2P22676 271 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 ZP4Q12836 540 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 PAMR1Q6UXH9 720 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 HIST3H2AQ7L7L0 130 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SSX8Q7RTT4 187 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 FAM86B1Q8N7N1 296 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 C1orf162Q8NEQ5 155 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 OR52N5Q8NH56 324 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 HIST1H2ACQ93077 130 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SGTBQ96EQ0 304 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 EMC6Q9BV81 110 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 EDARQ9UNE0 448 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 SLC25A15Q9Y619 301 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 ROS1P08922 2347 aa16.45■□□□□ 0.22
PRPF40B-206ENST00000547764 AKAP9Q99996 3911 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 ARPC2O15144 300 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 PIP5K1CO60331 668 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 OR7A10O76100 309 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 PRSS23O95084 383 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 PLAUP00749 431 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 FUT1P19526 365 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 IST1P53990 364 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 TRAM2Q15035 370 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 NCMAPQ5T1S8 102 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 RINLQ6ZS11 566 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 WDFY1Q8IWB7 410 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 TMEM123Q8N131 208 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 WDR31Q8NA23 367 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 NINJ1Q92982 152 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms