RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 EMC3Q9P0I2 261 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 PHF3Q92576 2039 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 LOC100130705A0A1B0GUX0 176 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 A6NIZ1 184 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 LRRN3E7EW58 273 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 PRRG2O14669 202 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 SMAD9O15198 467 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 RNF13O43567 381 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 IFNGP01579 166 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 PTNP21246 168 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 SDHAP31040 664 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 RPL4P36578 427 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 FXYD6P3P58550 94 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 RAP1BP61224 184 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 RAP1AP62834 184 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 ADARB1P78563 741 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 TEKQ02763 1124 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 LY6DQ14210 128 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 PGGHGQ32M88 737 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 EEF1A1P5Q5VTE0 462 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 CASP12Q6UXS9 341 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 Q6ZPB1 254 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 FCRLAQ7L513 359 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 GALNT5Q7Z7M9 940 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 CHERPQ8IWX8 916 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 UEVLDQ8IX04 471 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 MBOAT4Q96T53 435 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 TSSK6Q9BXA6 273 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 TSPAN10Q9H1Z9 355 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 TP63Q9H3D4 680 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 TXNIPQ9H3M7 391 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 ASF1BQ9NVP2 202 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 FAM118AQ9NWS6 357 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 KLHL21Q9UJP4 597 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 RCE1Q9Y256 329 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF835Q9Y2P0 537 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 DOCK7Q96N67 2140 aa14.32□□□□□ -0.12
PRPF40A-212ENST00000545856 CFAP46Q8IYW2 2715 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 KALRNO60229 2985 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 OR6C65A6NJZ3 312 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 SLC22A20A6NK97 555 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF724A8MTY0 619 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 NPIPA2E9PIF3 369 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 NPIPA3F8WFD2 350 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 MS4A18H0YCH9 400 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 BHLHE40O14503 412 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 MITFO75030 526 aaPredicted RBP14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 AKR7A3O95154 331 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 SOX14O95416 240 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 CRHP06850 196 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF43P17038 809 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 GGT2P36268 569 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 AQP2P41181 271 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 SLC17A1Q14916 467 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 MS4A18Q3C1V0 323 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 C12orf73Q69YU5 71 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 TMEM99Q8N816 258 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 CPT1CQ8TCG5 803 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 WNT2BQ93097 391 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 TMEM45BQ96B21 275 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 SAMD8Q96LT4 415 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF570Q96NI8 536 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 TM9SF2Q99805 663 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 IFT27Q9BW83 186 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 SRXN1Q9BYN0 137 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 ANKRD60Q9BZ19 345 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 FN3KQ9H479 309 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 EGLN3Q9H6Z9 239 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 BCO1Q9HAY6 547 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 LUZP4Q9P127 313 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 CLCF1Q9UBD9 225 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 GMPPBQ9Y5P6 360 aa14.31□□□□□ -0.12
PRPF40A-212ENST00000545856 MED12LQ86YW9 2145 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 CLCA1A8K7I4 914 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 ABOP16442 354 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 AHCYP23526 432 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 HSF1Q00613 529 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 C19orf57Q0VDD7 668 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 GINS1Q14691 196 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 PON3Q15166 354 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 GXYLT1Q4G148 440 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 ACSF3Q4G176 576 aaPredicted RBP14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 GFRALQ6UXV0 394 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 USP51Q70EK9 711 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 FAM122BQ7Z309 247 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 OR8D4Q8NGM9 314 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 OR8J1Q8NGP2 316 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 TUBA1CQ9BQE3 449 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 KATNB1Q9BVA0 655 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 POLDIP3Q9BY77 421 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 PRRG4Q9BZD6 226 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 PLA2G12AQ9BZM1 189 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 CMC2Q9NRP2 79 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 PARPBPQ9NWS1 579 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 B3GAT1Q9P2W7 334 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 GRHPRQ9UBQ7 328 aa14.3□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF716A6NP11 495 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 TRAF3IP2O43734 574 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms