RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MARCH7Q9H992 704 aa13.05□□□□□ -0.32
CLSTN3-216ENST00000545663 UBAP1Q9NZ09 502 aa13.05□□□□□ -0.32
CLSTN3-216ENST00000545663 ASH2LQ9UBL3 628 aa13.05□□□□□ -0.32
CLSTN3-216ENST00000545663 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
CLSTN3-216ENST00000545663 RAP2CQ9Y3L5 183 aa13.05□□□□□ -0.32
CLSTN3-216ENST00000545663 AZIN1O14977 448 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 PDPK1O15530 556 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 RSL1D1O76021 490 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 HMGN2P05204 90 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 CRYBB2P43320 205 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 SLC1A6P48664 564 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 LASP1Q14847 261 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 GLIPR1L2Q4G1C9 344 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 DCST2Q5T1A1 773 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 OLIG3Q7RTU3 272 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 FAM76AQ8TAV0 307 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 TMEM234Q8WY98 164 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 CHIAQ9BZP6 476 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 PIGUQ9H490 435 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 ZNF385DQ9H6B1 395 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 SIRT5Q9NXA8 310 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 TRAPPC4Q9Y296 219 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
CLSTN3-216ENST00000545663 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 PPIAL4CA0A0B4J2A2 164 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 IGHV1-69-2A0A0G2JMI3 117 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 CLPXO76031 633 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 CSF1P09603 554 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 UBTFL6P0CB48 400 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 BGNP21810 368 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 ARR3P36575 388 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 GSTM5P46439 218 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 PROK1P58294 105 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 SLC35A1P78382 337 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 DEFB112Q30KQ8 113 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 ZCCHC12Q6PEW1 402 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 ZCCHC23Q6ZST2 131 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 ZNF837Q96EG3 531 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 TSPAN32Q96QS1 320 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 NAA11Q9BSU3 229 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 DUSP22Q9NRW4 184 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 SLC6A13Q9NSD5 602 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 SEC14L4Q9UDX3 406 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 HAO1Q9UJM8 370 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
CLSTN3-216ENST00000545663 CLDN25C9JDP6 229 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 SLC28A1O00337 649 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 AKR7A3O95154 331 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 CLPTM1O96005 669 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF35P13682 527 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 RYKP34925 604 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 GLRXP35754 106 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 RPL14P50914 215 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 ROR2Q01974 943 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 BST1Q10588 318 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 OXLD1Q5BKU9 147 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 C9orf139Q6ZV77 190 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 USP51Q70EK9 711 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 TRIM46Q7Z4K8 759 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 IL17RDQ8NFM7 739 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF317Q96PQ6 595 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 STACQ99469 402 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 NOX1Q9Y5S8 564 aa13.02□□□□□ -0.33
CLSTN3-216ENST00000545663 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 ZC3H12DA2A288 527 aaKnown RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 C5orf63A6NC05 138 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 SNNO75324 88 aaPredicted RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF12P17014 697 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 CAPZA2P47755 286 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 FXNQ16595 210 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 IMPG1Q17R60 797 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 NKPD1Q17RQ9 610 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 KANK2Q63ZY3 851 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 PARP8Q8N3A8 854 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF563Q8TA94 476 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 RAB1CQ92928 201 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 C7orf26Q96N11 449 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms