RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PRR14LQ5THK1 2151 aa10.38□□□□□ -0.75
HDAC4-216ENST00000544989 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 CPSF4LA6NMK7 179 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ENTPD5O75356 428 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF432O94892 652 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 OR5F1O95221 314 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 OR6A2O95222 327 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 IGF2P01344 180 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 HIST1H2ABP04908 130 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 KDELR2P33947 212 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 SELENOPP49908 381 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 CLDN17P56750 224 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 TAS2R41P59536 307 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 UBE2NP61088 152 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 RPS4XP62701 263 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ADAM8P78325 824 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 HIST3H2AQ7L7L0 130 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 CARM1Q86X55 608 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 POU5F2Q8N7G0 328 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 OR5J2Q8NH18 312 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 HIST1H2ACQ93077 130 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 TRMT61AQ96FX7 289 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 HS6ST2Q96MM7 605 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ELAC2Q9BQ52 826 aaKnown RBP10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF426Q9BUY5 554 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 PRR14Q9BWN1 585 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ALG2Q9H553 416 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 NANSQ9NR45 359 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 B3GAT1Q9P2W7 334 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF229Q9UJW7 825 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 SLC7A7Q9UM01 511 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 SH3GLB1Q9Y371 365 aa10.37□□□□□ -0.75
HDAC4-216ENST00000544989 CADP27708 2225 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 FLNAP21333 2647 aaKnown RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 GMNCA6NCL1 334 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF726A6NNF4 738 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 PLPP3O14495 311 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ABCD4O14678 606 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 GSTA4O15217 222 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 SNX3O60493 162 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 PLAUP00749 431 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 CD40P25942 277 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 LSP1P33241 339 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 CDH11P55287 796 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 SELENOWP63302 87 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ETFDHQ16134 617 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 C3orf36Q3SXR2 165 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 LRRC23Q53EV4 343 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 CYBRD1Q53TN4 286 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ANKRD16Q6P6B7 361 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 HDDC2Q7Z4H3 204 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 FAM169BQ8N8A8 192 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 OR1K1Q8NGR3 316 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 SMAP2Q8WU79 429 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ADAD1Q96M93 576 aaKnown RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ALKBH3Q96Q83 286 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 WFDC6Q9BQY6 131 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF701Q9NV72 531 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-216ENST00000544989 POU2F3Q9UKI9 436 aa10.36□□□□□ -0.75
HDAC4-216ENST00000544989 RAI1Q7Z5J4 1906 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 FAM171A2A8MVW0 826 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 MS4A18H0YCH9 400 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 M0R1B8 84 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 TRAF3IP2O43734 574 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 GMNNO75496 209 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 ADORA3P0DMS8 318 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 AHCYP23526 432 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 PTH2RP49190 550 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 NUDT2P50583 147 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF83P51522 516 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 CRYBA2P53672 197 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 ROR2Q01974 943 aaKnown RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 POU3F1Q03052 451 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 LIPEQ05469 1076 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 ZP4Q12836 540 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 ZNF74Q16587 644 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 MS4A18Q3C1V0 323 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 Q5PR19 223 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 AGAP6Q5VW22 663 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 DEF8Q6ZN54 512 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 RBM45Q8IUH3 476 aaKnown RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 SLC15A3Q8IY34 581 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-216ENST00000544989 KDM8Q8N371 416 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 KBTBD8Q8NFY9 601 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 MOGAT1Q96PD6 335 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 OR2M2Q96R28 347 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 KCNS3Q9BQ31 491 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 BDH2Q9BUT1 245 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 FAM107BQ9H098 131 aa10.35□□□□□ -0.75
HDAC4-216ENST00000544989 MYLK2Q9H1R3 596 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms