RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	DACT3	Q96B18	629 aa	Predicted RBP	11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	NXPE2	Q96DL1	559 aa		11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	LCOR	Q96JN0	433 aa	Predicted RBP	11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	PCED1A	Q9H1Q7	454 aa		11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	SLC17A5	Q9NRA2	495 aa		11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	TAS2R10	Q9NYW0	307 aa		11.89	□□□□□ -0.51
CPSF7-223	ENST00000544669	TRBV5-5	A0A0J9YX44	114 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	C17orf105	B2RV13	164 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669		B4DGG1	531 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	GPR171	O14626	319 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	SELENOF	O60613	162 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	KHDRBS3	O75525	346 aa	Known RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	UQCRC1	P31930	480 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	PER3	P56645	1201 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	SKP2	Q13309	424 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	FDX2	Q6P4F2	183 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	UTS2B	Q765I0	119 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	CDC20B	Q86Y33	519 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ARL14	Q8N4G2	192 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	SPIC	Q8N5J4	248 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	LRRC75A	Q8NAA5	344 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZNF563	Q8TA94	476 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	GIMAP1	Q8WWP7	306 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	PDCD1LG2	Q9BQ51	273 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	UTP23	Q9BRU9	249 aa	Known RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	C20orf85	Q9H1P6	137 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	CD207	Q9UJ71	328 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ELF5	Q9UKW6	265 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	IGKV1D-42	A0A075B6H8	117 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ANKRD20A5P	A0PJZ0	165 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ANXA2P2	A6NMY6	339 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	TNFRSF10A	O00220	468 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	XKRY	O14609	159 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZFPL1	O95159	310 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ANXA2	P07355	339 aa	Known RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	PGC	P20142	388 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	DNASE1	P24855	282 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	CXCR1	P25024	350 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	AQP2	P41181	271 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	MECP2	P51608	486 aa	Known RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	HCCS	P53701	268 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	RAB14	P61106	215 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	DEFB110	Q30KQ9	67 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	HLA-DQA1	Q5Y7H0	255 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	TEX261	Q6UWH6	196 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	STAC2	Q6ZMT1	411 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	EXD3	Q8N9H8	876 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	LSM14A	Q8ND56	463 aa	Known RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	OR11H7	Q8NGC8	314 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	OR51L1	Q8NGJ5	315 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	OR13C5	Q8NGS8	318 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	YIPF2	Q9BWQ6	316 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	ADAM19	Q9H013	955 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	LIN7B	Q9HAP6	207 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	HRASLS	Q9HDD0	168 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	WSB2	Q9NYS7	404 aa	Predicted RBP	11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	COPS3	Q9UNS2	423 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669		U3KQ87	197 aa		11.88	□□□□□ -0.51
CPSF7-223	ENST00000544669	TRAV36DV7	A0A075B6V5	113 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669		A0A1W2PPK0	400 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	LINC00862	A6NCI5	91 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	GNB5	O14775	395 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZNF254	O75437	659 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	SLC25A12	O75746	678 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	SERPINI2	O75830	405 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	UTS2	O95399	124 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	CSF1	P09603	554 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	CD1C	P29017	333 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	CDKN2A	P42771	156 aa	Known RBP	11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	OR3A3	P47888	321 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	EEF1A1P5	Q5VTE0	462 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	LIPN	Q5VXI9	398 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	PWWP2B	Q6NUJ5	590 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	KCTD18	Q6PI47	426 aa	Predicted RBP	11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	FCRLA	Q7L513	359 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	TIGD4	Q8IY51	512 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	SYNPR	Q8TBG9	265 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	HSD17B8	Q92506	261 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	DAZL	Q92904	295 aa	Known RBP	11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	RASD2	Q96D21	266 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669		Q96M85	177 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	INTS14	Q96SY0	518 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	MAP3K3	Q99759	626 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZFP64	Q9NPA5	681 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	SOHLH2	Q9NX45	425 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	FOXJ3	Q9UPW0	622 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	FKBP7	Q9Y680	259 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	DOCK8	Q8NF50	2099 aa		11.87	□□□□□ -0.51
CPSF7-223	ENST00000544669	OR6C76	A6NM76	312 aa		11.86	□□□□□ -0.51
CPSF7-223	ENST00000544669	TGFBR3L	H3BV60	316 aa		11.86	□□□□□ -0.51
CPSF7-223	ENST00000544669	ZNF593	O00488	134 aa	Predicted RBP	11.86	□□□□□ -0.51
CPSF7-223	ENST00000544669	PIN1P1	O15428	100 aa		11.86	□□□□□ -0.51
CPSF7-223	ENST00000544669	UPK3A	O75631	287 aa		11.86	□□□□□ -0.51
CPSF7-223	ENST00000544669	RBBP9	O75884	186 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms