RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	SBSN	Q6UWP8	590 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	DGAT2L6	Q6ZPD8	337 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585		Q6ZSV7	163 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	GCNT2	Q8N0V5	402 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	TCAIM	Q8N3R3	496 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	UXS1	Q8NBZ7	420 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	FAM45A	Q8TCE6	357 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	MOB3A	Q96BX8	217 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	MTERF3	Q96E29	417 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	WDR34	Q96EX3	536 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	ZBED6CL	Q96FA7	236 aa	Predicted RBP	5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	CMTM7	Q96FZ5	175 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	TMEM237	Q96Q45	408 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	CENPK	Q9BS16	269 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	TRMO	Q9BU70	441 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	EFCAB11	Q9BUY7	163 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	QTRT1	Q9BXR0	403 aa	Known RBP	5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	ERVK-6	Q9BXR3	956 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	LRTM1	Q9HBL6	345 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	DNAJC11	Q9NVH1	559 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	PHF11	Q9UIL8	331 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	RNF150	Q9ULK6	438 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	ERVK-19	Q9WJR5	959 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	CFL2	Q9Y281	166 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	OARD1	Q9Y530	152 aa		5.36	□□□□□ -1.55
CPSF7-222	ENST00000544585	SMIM30	A4D0T7	59 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ST8SIA3	O43173	380 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ICOSLG	O75144	302 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SEC22B	O75396	215 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	TGM6	O95932	706 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	CGA	P01215	116 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	KRT14	P02533	472 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	INHBA	P08476	426 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ZNF708	P17019	499 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PGAM1	P18669	254 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SERPINB1	P30740	379 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SRD5A2	P31213	254 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	MAGEA3	P43357	314 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	KHK	P50053	298 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	LHX2	P50458	406 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	NME5	P56597	212 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PROK1	P58294	105 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SEC61B	P60468	96 aa	Known RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	IL1RL1	Q01638	556 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ILF2	Q12905	390 aa	Known RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	DOC2A	Q14183	400 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	TRIP13	Q15645	432 aa	Predicted RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PPP1R3A	Q16821	1122 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	KRTAP24-1	Q3LI83	254 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	GCNT6	Q5T4J0	391 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	LIPN	Q5VXI9	398 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SULT1C3	Q6IMI6	304 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SLC18B1	Q6NT16	456 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ANGPTL8	Q6UXH0	198 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	TMEM64	Q6YI46	380 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585		Q6ZTK2	550 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	FRA10AC1	Q70Z53	315 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	IFNE	Q86WN2	208 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PLCZ1	Q86YW0	608 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	CNTN4	Q8IWV2	1026 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	CNEP1R1	Q8N9A8	125 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	WDSUB1	Q8N9V3	476 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	MAPK1IP1L	Q8NDC0	245 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	OR2AK2	Q8NG84	335 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	OR7G1	Q8NGA0	311 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PRSS3P2	Q8NHM4	247 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	THAP6	Q8TBB0	222 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ZNF473	Q8WTR7	871 aa	Known RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ADIPOR1	Q96A54	375 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	RHNO1	Q9BSD3	238 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	NAT9	Q9BTE0	207 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	MS4A8	Q9BY19	250 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	OR2B2	Q9GZK3	357 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	ZNF350	Q9GZX5	532 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SEMA6A	Q9H2E6	1030 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	METTL7A	Q9H8H3	244 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	WDR41	Q9HAD4	459 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	MYNN	Q9NPC7	610 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	PROCR	Q9UNN8	238 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	HEATR5A	Q86XA9	2040 aa		5.35	□□□□□ -1.55
CPSF7-222	ENST00000544585	SLC22A20	A6NK97	555 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	GOLGA8M	H3BSY2	632 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	CRCP	O75575	148 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	STK16	O75716	305 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	AIFM1	O95831	613 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	FGG	P02679	453 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	MAPK3	P27361	379 aa	Predicted RBP	5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	PIK3R1	P27986	724 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	SSR2	P43308	183 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	CLDN18	P56856	261 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	DSCR9	P59020	149 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	IRF8	Q02556	426 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	CHIT1	Q13231	466 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	TGFBI	Q15582	683 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	SPANXN3	Q5MJ09	141 aa		5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.34	□□□□□ -1.55
CPSF7-222	ENST00000544585	ANKRD22	Q5VYY1	191 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms