RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PTPRAP18433 802 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 SLC6A2P23975 617 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 NFYBP25208 207 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ARR3P36575 388 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CDKN1AP38936 164 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ETV6P41212 452 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF157P51786 506 aaPredicted RBP8.18□□□□□ -1.1
VPS13D-212ENST00000543766 GABRA6Q16445 453 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZSWIM7Q19AV6 140 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 COL5A1-AS1Q5SY13 56 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CPTPQ5TA50 214 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM268Q5VZI3 342 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 STEAP4Q687X5 459 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF774Q6NX45 483 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CASP12Q6UXS9 341 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF534Q76KX8 674 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ADCK2Q7Z695 626 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CANT1Q8WVQ1 401 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CPXM1Q96SM3 734 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FAM110AQ9BQ89 295 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CHIAQ9BZP6 476 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 PCDHB14Q9Y5E9 798 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 GLUD2P49448 558 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CSRP3P50461 194 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 PLP1P60201 277 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ARF6P62330 175 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ABHD17CQ6PCB6 329 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 LINC00696Q6ZRV3 163 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 NAXDQ8IW45 347 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 MFSD6LQ8IWD5 586 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 METTL27Q8N6F8 245 aaPredicted RBP8.18□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM161BQ8NDZ6 487 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 PXT1Q8NFP0 134 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 KCNG3Q8TAE7 436 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 RDH11Q8TC12 318 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FAM45AQ8TCE6 357 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 RNFT2Q96EX2 444 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CENPNQ96H22 339 aaPredicted RBP8.18□□□□□ -1.1
VPS13D-212ENST00000543766 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 OR5B12Q96R08 314 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF649Q9BS31 505 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FN3KRPQ9HA64 309 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ATG4BQ9Y4P1 393 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 KLK8O60259 260 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 GBAP04062 536 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 AGAP20933 346 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 RGRP47804 291 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 BTG1P62324 171 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 GUCA2BQ16661 112 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 DUOXA1Q1HG43 343 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 MICBQ29980 383 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 SAMD4BQ5PRF9 694 aaKnown RBP8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FIGLAQ6QHK4 219 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 COLCA1Q6ZS62 124 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 STRADAQ7RTN6 431 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 AQP12AQ8IXF9 295 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 KLHDC8BQ8IXV7 354 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 BEND2Q8NDZ0 799 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 OR5D13Q8NGL4 314 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 DYNLL2Q96FJ2 89 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 C3orf30Q96M34 536 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 CEACAM4O75871 244 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 FADS2O95864 444 aaKnown RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 TGFB1P01137 390 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CELA3AP09093 270 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 EBLN1P0CF75 366 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 ENGP17813 658 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 MTNR1AP48039 350 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 INPP5JQ15735 1006 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 KIRREL2Q6UWL6 708 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 C12orf54Q6X4T0 127 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 LYG2Q86SG7 212 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 AQP11Q8NBQ7 271 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 OR4K2Q8NGD2 314 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 FOXN4Q96NZ1 517 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SORCS2Q96PQ0 1159 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 BARHL1Q9BZE3 327 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 RASL12Q9NYN1 266 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 YJEFN3A6XGL0 299 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 A8MXK9 166 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 KLK10O43240 276 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 ORC5O43913 435 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SERPINA7P05543 415 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 DPEP1P16444 411 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 UCP3P55916 312 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 TLE3Q04726 772 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 ARHGAP1Q07960 439 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 NFATC2Q13469 925 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 HERPUD1Q15011 391 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CEACAM21Q3KPI0 293 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 TRMT10BQ6PF06 316 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms