RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
RTN3-213ENST00000543552 AQP5P55064 265 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 NAAAQ02083 359 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 LGALS3BPQ08380 585 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 SCARB2Q14108 478 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 SQLEQ14534 574 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 UEVLDQ8IX04 471 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 SCAIQ8N9R8 606 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 IL17RDQ8NFM7 739 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 RNF217Q8TC41 542 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 HTRA1Q92743 480 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
RTN3-213ENST00000543552 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 LPAR3Q9UBY5 353 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 ANGPT4Q9Y264 503 aa11.43□□□□□ -0.58
RTN3-213ENST00000543552 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
RTN3-213ENST00000543552 A0A096LPE4 126 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 IGLV1-44P01699 117 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 CECR9P0C854 216 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 CBR1P16152 277 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 GRPRP30550 384 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ARR3P36575 388 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 GZMKP49863 264 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ARF1P84077 181 aaKnown RBP11.42□□□□□ -0.58
RTN3-213ENST00000543552 EFNB3Q15768 340 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 AGKQ53H12 422 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 LINGO2Q7L985 606 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 KDM8Q8N371 416 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 HIPK4Q8NE63 616 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 STON2Q8WXE9 905 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ANKRD27Q96NW4 1050 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
RTN3-213ENST00000543552 EBF4Q9BQW3 602 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 CRLF2Q9HC73 371 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 SLCO1B3Q9NPD5 702 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 NOX1Q9Y5S8 564 aa11.42□□□□□ -0.58
RTN3-213ENST00000543552 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 A0A087WUJ7 227 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 ZNF99A8MXY4 864 aaPredicted RBP11.41□□□□□ -0.58
RTN3-213ENST00000543552 GPRIN2O60269 458 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 OR4A8P0C604 315 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 GPX2P18283 190 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 HTR2AP28223 471 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 CAPZA2P47755 286 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 PPOXP50336 477 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.58
RTN3-213ENST00000543552 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 CYP51A1Q16850 503 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 CEACAM16Q2WEN9 425 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 PAGE3Q5JUK9 113 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 TMEM123Q8N131 208 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 C11orf65Q8NCR3 313 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
RTN3-213ENST00000543552 LRR1Q96L50 414 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 OR2M2Q96R28 347 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 TMEM43Q9BTV4 400 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 BEX2Q9BXY8 128 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
RTN3-213ENST00000543552 CUBNO60494 3623 aa11.41□□□□□ -0.58
RTN3-213ENST00000543552 FBN3Q75N90 2809 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 IGKV1D-42A0A075B6H8 117 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 TRBV5-3A0A0A0MS03 114 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 A0A1B0GX12 115 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 ANGPT2O15123 496 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 TRAF3IP2O43734 574 aaPredicted RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 FMO6PO60774 539 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 ENTPD5O75356 428 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 C8BP07358 591 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 AQP1P29972 269 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 NR4A2P43354 598 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms