RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	PILRA	Q9UKJ1	303 aa		11.82	□□□□□ -0.52
DDX11-223	ENST00000542838	FXYD6-FXYD2	A0A087WZ82	144 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	GRXCR1	A8MXD5	290 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838		H0YGG7	62 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	CYR61	O00622	381 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	GLCE	O94923	617 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	IGKV1D-16	P01601	117 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	PPP3CB	P16298	524 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ADRA2C	P18825	462 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	MECP2	P51608	486 aa	Known RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	GPR143	P51810	404 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ARF3	P61204	181 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	FAM53B	Q14153	422 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	KIR2DS3	Q14952	304 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	PCGF3	Q3KNV8	242 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838		Q499Y3	187 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	LEG1	Q6P5S2	330 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	TMPRSS12	Q86WS5	348 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNF511	Q8NB15	262 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	C15orf40	Q8WUR7	153 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	RERG	Q96A58	199 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	AIFM2	Q9BRQ8	373 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ALG12	Q9BV10	488 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	SHARPIN	Q9H0F6	387 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	FXYD6	Q9H0Q3	95 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ZC4H2	Q9NQZ6	224 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	RXFP3	Q9NSD7	469 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	EML5	Q05BV3	1969 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	KRBOX1	C9JBD0	128 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	TEX46	H3BTG2	121 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	CTNS	O60931	367 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	RBBP9	O75884	186 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	GLS	O94925	669 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	LDOC1	O95751	146 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	RLN1	P04808	185 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	FAU	P35544	74 aa	Known RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	PSG6	Q00889	435 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	IL10RA	Q13651	578 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	C2orf68	Q2NKX9	166 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNF550	Q7Z398	422 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	FAM220A	Q7Z4H9	259 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	GLB1L2	Q8IW92	636 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	OR5AK2	Q8NH90	309 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	CCL4L1	Q8NHW4	92 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	RNF166	Q96A37	237 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	PNPLA2	Q96AD5	504 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	CTHRC1	Q96CG8	243 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	NMNAT2	Q9BZQ4	307 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	OPN4	Q9UHM6	478 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNF346	Q9UL40	294 aa	Known RBP	11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	ETV7	Q9Y603	341 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	C5orf42	Q9H799	3197 aa		11.81	□□□□□ -0.52
DDX11-223	ENST00000542838	TMEM72	A0PK05	275 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	CHURC1-FNTB	B4DL54	471 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ATP6V1G2-DDX39B	F2Z307	99 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TNFSF14	O43557	240 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	MAS1	P04201	325 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNF35	P13682	527 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	LTB	Q06643	244 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	PLA2G7	Q13093	441 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	RBMS2	Q15434	407 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	CSRP2	Q16527	193 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	SLC6A19	Q695T7	634 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ENPP7	Q6UWV6	458 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	OVCH2	Q7RTZ1	564 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838		Q96M85	177 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ADAD1	Q96M93	576 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ZFYVE21	Q9BQ24	234 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3D	A0A087WVF3	549 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3I	A0A087WXS9	549 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ANXA2P2	A6NMY6	339 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	C4orf47	A7E2U8	309 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	HMSD	A8MTL9	139 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3L	B9A6J9	549 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ARPC3	O15145	178 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	OR10H2	O60403	315 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ANXA2	P07355	339 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TACSTD2	P09758	323 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3H	P0C7X1	549 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	GABRA1	P14867	456 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	PVR	P15151	417 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	MAPK3	P27361	379 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	MNDA	P41218	407 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	MAZ	P56270	477 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	H2BFS	P57053	126 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	UBE2M	P61081	183 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ALKBH1	Q13686	389 aa	Known RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNHIT3	Q15649	155 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	ZNF684	Q5T5D7	378 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	LINC01590	Q5TEZ4	76 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3C	Q6IPX1	549 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	SLC36A1	Q7Z2H8	476 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	OR4C16	Q8NGL9	310 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	SIPA1	Q96FS4	1042 aa		11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	SCARF2	Q96GP6	870 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX11-223	ENST00000542838	DPYSL5	Q9BPU6	564 aa		11.8	□□□□□ -0.52

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