RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FCN1O00602 326 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CLOCKO15516 846 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PSTPIP1O43586 416 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PFDN1O60925 122 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 UGT2B17O75795 530 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PLEKP08567 350 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 SRMP19623 302 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 EIF2S2P20042 333 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 GSTM3P21266 225 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 KITLGP21583 273 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CD9P21926 228 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ANXA13P27216 316 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 YWHABP31946 246 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CD80P33681 288 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 DAOAP59103 153 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 RAB11AP62491 216 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 KCNJ2P63252 427 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 BASP1P80723 227 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPS25P82663 173 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MYL5Q02045 173 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PAX5Q02548 391 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 RAB11BQ15907 218 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPL23Q16540 153 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MTHFSDQ2M296 383 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 TRIM16LQ309B1 348 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 HSP90AA4PQ58FG1 418 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MS4A13Q5J8X5 152 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM120AOSQ5T036 256 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 LGSNQ5TDP6 509 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 REP15Q6BDI9 236 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 AWAT2Q6E213 333 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 TWF2Q6IBS0 349 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PWWP2BQ6NUJ5 590 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 HSDL2Q6YN16 418 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC00523Q86TU6 105 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF589Q86UQ0 364 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC47A2Q86VL8 602 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MFSD6LQ8IWD5 586 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 OR2L13Q8N349 312 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MTURNQ8N3F0 131 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 FBXL16Q8N461 479 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PQLC3Q8N755 202 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF491Q8N8L2 437 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC00301Q8NCQ3 95 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PRSS33Q8NF86 280 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 NUP37Q8NFH4 326 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 OR4F6Q8NGB9 312 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF519Q8TB69 540 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ARNTL2Q8WYA1 636 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 FAF2Q96CS3 445 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM122AQ96E09 287 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 SNF8Q96H20 258 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF641Q96N77 438 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CNN2Q99439 309 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 NAPGQ99747 312 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 HSD17B14Q9BPX1 270 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CCDC28BQ9BUN5 200 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPL37Q9BZE1 423 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MMP28Q9H239 520 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 CENPHQ9H3R5 247 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ELOVL6Q9H5J4 265 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 NHEJ1Q9H9Q4 299 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 INPP5EQ9NRR6 644 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 LYARQ9NX58 379 aaKnown RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 MTCH1Q9NZJ7 389 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 RHBDD3Q9Y3P4 386 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 GAKO14976 1311 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 UBN2Q6ZU65 1347 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TRGV8A0A0C4DH27 118 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 LOC100653049A0A140TA62 436 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 IQANK1A0A1B0GTG1 560 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TRABD2BA6NFA1 517 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 A8MXQ7 604 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF879B4DU55 563 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ERVV-2B6SEH9 535 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 GOLGA8KD6RF30 607 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 H3BQV1 296 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 K7EQG2 157 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CHMP2AO43633 222 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CXCL13O43927 109 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 KRT34O76011 436 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ATP6V1G2O95670 118 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 IGHV3-9P01782 118 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 IGHG1P01857 330 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MMP1P03956 469 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SNRPCP09234 159 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CT62P0C5K7 136 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 T-ENOLP0DO92 83 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 RNH1P13489 461 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SERPINA2P20848 420 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 STOMP27105 288 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 GTF2E2P29084 291 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 FGF9P31371 208 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms